Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03520 ATGGGAAGAATCGAGAGACTTCAATCCTCCTACCAATCTCTGGATGAATCGTTCGAAATTGGGAAAGAGATGTATCGTGGACAACAATACAGTCAAATTTACTTCGCTCGTCTTCATTTGATGAGAACTCTTTTGTATTCTCTTGTTCCTCATTGGAAACCTAATTCTCCTGTTTGCACGGTGTTGGGATTGGAAGAGGGAAAGGACTGTGTCATTGTTGGAACATTGTTTAAACACATGAAATTGAAACCTTGCATACTTGATGAGTATTCTAAAGAGAGGTCGGTGGTTCCGCTTGTCAAGCCGCATAACTTTGTGCACCAAGATGATTATCTTGATTTGGAAGATGAAAGTGGAAGAGTGAAGCTTAGTGGGAATATTATTGTACCATCTGTTTATGTAACAGGAATTGTGGTTGCTATATATGGTAAAGAAACGGGAGCAGGTGATTTTTTGGTTCATGAAGTTCTAGAAGCTGGCTTACCACCGCAGATAGAATTCCCTATTAAATCAAGGGAAGACAGATATGTTGTTCTTGTGTCAGGATTAAGTGTTGGGAGCAGCAGGTCTAACCCTCTGCAGTTTCAGCTTCTAGTTGATCATATTACTGGTCATTTAGGAGATGAGAAGGAGCAAAGTATTGCATCACAAATTGTTCGTGTAGTCATTGCTGGAAATTCTGTTGAGATACCTCGTGGACTTCTTAATGGACAGAATTTGGCTTCAAAAGATCTCTCGAGGATGGCAGAACCAGTAAAGGAGCTAGATATTCTGTTGAATCAGATTGCTGCTGCTTTGCCATTGGATATTACTTATAGAATCAGGTTCATCCCCAAGTTGTTAATAGTTCCACTCAGATATTACTTAACTAAATGA 876 0.3961 MGRIERLQSSYQSLDESFEIGKEMYRGQQYSQIYFARLHLMRTLLYSLVPHWKPNSPVCTVLGLEEGKDCVIVGTLFKHMKLKPCILDEYSKERSVVPLVKPHNFVHQDDYLDLEDESGRVKLSGNIIVPSVYVTGIVVAIYGKETGAGDFLVHEVLEAGLPPQIEFPIKSREDRYVVLVSGLSVGSSRSNPLQFQLLVDHITGHLGDEKEQSIASQIVRVVIAGNSVEIPRGLLNGQNLASKDLSRMAEPVKELDILLNQIAAALPLDITYRIRFIPKLLIVPLRYYLTK 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03520 291 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 3 270 IPR024826 -
Trre14g03520 291 Gene3D - 35 159 - -
Trre14g03520 291 Pfam DNA polymerase delta subunit OB-fold domain 29 156 IPR040663 -
Trre14g03520 291 Gene3D - 168 271 - -
Trre14g03520 291 FunFam DNA polymerase delta subunit 2 35 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03520 Trre-Chr14 43729599 43732695 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03520 5 270 Core DNA Replication Machinery Family AT2G42120 75.188 2.08e-147 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03520 K02328 - gmx:100780072 462.611