Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03515 ATGGTGAAACGCGAATTGAATATTCCTATTCACAACGACGCTTCTGATAACTCCGACGACGTTGATTATGAAACTGTTCACGGCCGTCGAAATCTCCGTTCTCGCTACCTCGCTGTTAAGAACATGATTAACGATGAGAGGGAGAATATTGCAAAGACTGACTCTGAAGTATTCGGTTCGATCATCAGTGAAATTGAGAACTTACACCAGTCAGTCACAACAACGAGAGAACAAGTAGCTGATGCACAGGCTCTTTTGGACATAACCAAATCCTTGGGTGTGTCTGTGAAAGCTCATTCTAGTGGTGGACTCACTCCTTCAGCCTTTGTCACTCACATTCTTGAAAAATTCGGACAACGAGGTGGAACAAGTACTAGCAGAAAAAAAATCAGCAGAAACTCGATAGCTTGGAACGACATTGGAGTTGCAGTTTCAAGTGTTTTTGGAAGGGCATATGGCTGTTCTACAGTGATTGGTCCAATGGATGCTAAACTAAAGCCGAGGAGGGTGTACCGAAAAAGGAGTGTGAAGCCCACTAAATTGGCACGGCCAGAAGAGATGATGGTTCGCTCTGTTGTTGGAGAGGAGTTGATGCCTCATAGGAATAATCAATCACAGATTTAG 624 0.4391 MVKRELNIPIHNDASDNSDDVDYETVHGRRNLRSRYLAVKNMINDERENIAKTDSEVFGSIISEIENLHQSVTTTREQVADAQALLDITKSLGVSVKAHSSGGLTPSAFVTHILEKFGQRGGTSTSRKKISRNSIAWNDIGVAVSSVFGRAYGCSTVIGPMDAKLKPRRVYRKRSVKPTKLARPEEMMVRSVVGEELMPHRNNQSQI 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03515 207 PANTHER UNCHARACTERIZED 14 187 IPR027786 GO:0005634|GO:0006281|GO:0030915
Trre14g03515 207 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03515 Trre-Chr14 43670228 43673928 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03515 26 187 Non-SMC Element family AT1G51130 43.558 3.66e-41 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03515 K22825 - gmx:100781485 209.534