Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03509 ATGAGCCGTTTTGAGTCACCAGCTTCTGCTTTTTATGCAACAGAAAATTGCATGGGATTTGCAGAATTTGATAGCCAAGTTTGTAACAATAATAATCCATCTTTGAGTTCTCAATTATATAAGCTTAATGATTTGGAGTTACCTTTGTATCAATCTCTAAGGGAAAATAATCATTTCTTGGAATCATCAAATCAACTTGATCCCAACTTTGAATTTTCAAACACTTTGCAAGCATTGGTTAAATCTCAATTGAATGGTAATCAATGCCTTAGATCGCCAGAAAACTCGAATAAATTTTCGTATGAGAATTTTCCCGGAATTAAGTCCTTTCCAATTGAACAACAAAAGTTGTTTTTTGATGGTCTTGCCTCAGTTAACAACAGCTCATCATTTTGTAACAAAGACTATATGGTTGCTCAAGGATCTTATCATTTATCTGTTGAACAATTGAATTTCTCTTCTCATCATGAGAAGTTGTGTCCAACAATTTCAGCCGGAAGTTCATCGACTTCTCTTGGAAACACTACTTCTAATGGGAATGTAGTCTCGAGTAAAACACGAATTAGATGGACAAAGGATCTTCATGAGAAGTTTGTTGAGTGTGTGAATCGCCTCGGAGGTGCTGATAAGGCAACACCAAAAGCTATATTAAAGATGATGGATTCTGATGTTTTGACCATATTCCATGTGAAAAGTCATTTACAAAAATATAGAACTGCAAAATTCATGCCAGAGTCAGTTCAAGGTAAATCTGACAAAAGAATGCATACAGAGGATCTGCATCATGTTGGTGTTAAAAGTGGATTTCAAATCAAGGAAGCACTTCAACTTCAATTAGATGCACAAAGGCGTCTTCATGAACAACTCGAGATTCAAAGAACATTACAATTGAGACTTGAGGAACAAGGCAAACAGCTGAAAGAAATGTTTGATAAGCAGCAGAAGACATGTAATAATCTCTTCAATACTCCAAATACAGTCAATGATGATGGTACAAAAATTAGTCATAAAGATGCTGAAGTTTCTATTTCTGAAGGGACTGAGAATTCATAA 1053 0.3504 MSRFESPASAFYATENCMGFAEFDSQVCNNNNPSLSSQLYKLNDLELPLYQSLRENNHFLESSNQLDPNFEFSNTLQALVKSQLNGNQCLRSPENSNKFSYENFPGIKSFPIEQQKLFFDGLASVNNSSSFCNKDYMVAQGSYHLSVEQLNFSSHHEKLCPTISAGSSSTSLGNTTSNGNVVSSKTRIRWTKDLHEKFVECVNRLGGADKATPKAILKMMDSDVLTIFHVKSHLQKYRTAKFMPESVQGKSDKRMHTEDLHHVGVKSGFQIKEALQLQLDAQRRLHEQLEIQRTLQLRLEEQGKQLKEMFDKQQKTCNNLFNTPNTVNDDGTKISHKDAEVSISEGTENS 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03509 350 Coils Coil 272 292 - -
Trre14g03509 350 NCBIfam myb-like DNA-binding domain, SHAQKYF class 185 240 IPR006447 GO:0003677
Trre14g03509 350 FunFam Myb family transcription factor 184 242 - -
Trre14g03509 350 Pfam Myb-like DNA-binding domain 189 238 IPR001005 -
Trre14g03509 350 Gene3D - 184 243 - -
Trre14g03509 350 SUPERFAMILY Homeodomain-like 183 239 IPR009057 -
Trre14g03509 350 Pfam MYB-CC type transfactor, LHEQLE motif 270 316 IPR025756 -
Trre14g03509 350 MobiDBLite consensus disorder prediction 327 350 - -
Trre14g03509 350 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 177 328 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03509 Trre-Chr14 43605088 43607578 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03509 172 313 G2-like Transcription Factor Family AT4G28610 55.556 1.06e-48 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Trre14g03509 Myb_DNA-binding 1.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03509 - - cam:101504038 533.102