Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03507 ATGTATCAACATTGGTCAAGGATGTATGGAACACAATGGGAATCTTACATGGGAATTAACAACCTAGTTAAGGTTGTTGAATCAGAACAAGTCATGAGTTTTGAGCCAATCAAATCAACCTGCAATAACATTGTGACTAGTAGTAGTAATCTTGAAACACCTTATGAAGGTTTTGGTGCAGTAACTATAGCTAAAATCAAAAGTTCTGTTGGTTTTCAAGGTGGAGAATATTATGATGAGGACCAGATTGAAGTTCCTGATTGGTGTTTTGATCAGTTTCCAAAGATAACTGATCCTCCATTGTTGAATTGTCAAGGTTCTGGTGATAACTTCACAAGCTCCTTGTACTCAGTTTCTAAGGAATCTTTGTTGTCTAATAATAGTGCAGATAGTCATAATTCTTCTGAAGAAGAATATAGTAATTTTCAGTCTGGAAATATGTCATTTTATGATCATTTTCCTCAAAATCATGATGAATTGATGAAGAATGATGCTTCCATAGATGAAAAGCCCTTTGAAATTTCATTTCAAAGAATTAAGTCGGGCACACCTACAAAGTCACACAAGCAGTCTCCTCAACTATATGGAATTGGGTGTGCCACTTCTAGCAATAATGCTTCTAGAAAAGCTATAATATGTAAAAGAAGGATAAGATGGACTGAGGAACTGCATGAATCGTTCATGATGATCGTTGATCACCTCGGTGGTCCAGACAAAGCAAAGCCAAAGGCTATACTAGATATGATGAAATCGAATTCGCTGTCTCTTTCTCATGTTAAAAGTCATTTACAGAAATGTAGATCTTCGGAACGCGTGCATAAAGCTTTGCGAGAAAGATCTGAGGAAGGACATAGAACAGATAGAGTCACCGAGCTTCAACTCAAAATCAGCCATATGCAAATTGAGGAATCGCGACAATTGCAACTAGAGGTTCGAAAGAGTATTTCACAACAGCTAGCGATGCAAAGAAGTTTGGAAACACTCATTGAAGAACATAGCGAGAAGCTCAAAGTAATGCAAAAAGAAAAAACCAACCAAAGAAAATCTTGGACACAACGAGAAATGACAGTTCCGAAATAA 1080 0.3685 MYQHWSRMYGTQWESYMGINNLVKVVESEQVMSFEPIKSTCNNIVTSSSNLETPYEGFGAVTIAKIKSSVGFQGGEYYDEDQIEVPDWCFDQFPKITDPPLLNCQGSGDNFTSSLYSVSKESLLSNNSADSHNSSEEEYSNFQSGNMSFYDHFPQNHDELMKNDASIDEKPFEISFQRIKSGTPTKSHKQSPQLYGIGCATSSNNASRKAIICKRRIRWTEELHESFMMIVDHLGGPDKAKPKAILDMMKSNSLSLSHVKSHLQKCRSSERVHKALRERSEEGHRTDRVTELQLKISHMQIEESRQLQLEVRKSISQQLAMQRSLETLIEEHSEKLKVMQKEKTNQRKSWTQREMTVPK 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03507 359 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 171 342 IPR044848 GO:0003700
Trre14g03507 359 SUPERFAMILY Homeodomain-like 212 268 IPR009057 -
Trre14g03507 359 MobiDBLite consensus disorder prediction 339 359 - -
Trre14g03507 359 Coils Coil 322 349 - -
Trre14g03507 359 Gene3D - 213 270 - -
Trre14g03507 359 NCBIfam myb-like DNA-binding domain, SHAQKYF class 214 268 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03507 Trre-Chr14 43591824 43593765 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03507 210 355 G2-like Transcription Factor Family AT3G04450 38.065 2.61e-23 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Trre14g03507 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03507 - - tpra:123891582 622.083