Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03506 ATGTATCAACATTGGTCAAGGATGTATGGAACACAATGGGAATCTTACATGGGAATTAACAACCTAGTTAAGGTTGTTGAATCAGAACAAGTCATGAGTTTTGAGCCAATCAAATCAACCTGCAATAACATTGTGACTAGTAGTAGTAATCTTGAAACACCTTATGAAGGTTTTGGTGCAGTAACTATAGCTAAAATCAAAAGTTCTGTTGGTTTTCAAGGTGGAGAATATTATGATGAGGACCAGATTGAAGTTCCTGATTGGTGTTTTGATCAGTTTCCAAAGATAACTGATCCTCCATTGTTGAATTGTCAAGGTTCTGGTGATAACTTCACAAGCTCCTTGTACTCAGTTTCTAAGGAATCTTTGTTGTCTAATAATAGTGCAGATAGTCATAATTCTTCTGAAGAAGAATATAGTAATTTTCAGTCTGGAAATATGTCATTTTATGATCATTTTCCTCAAAATCATGATGAATTGATGAAGAATGATGCTTCCATAGATGAAAAGCCCTTTGAAATTTCATTTCAAAGAATTAAGTCGGGCACACCTACAAAGTCACACAAGCAGTCTCCTCAACTATATGGAATTGGGTGTGCCACTTCTAGCAATAATGCTTCTAGAAAAGCTATAATATGTAAAAGAAGGATAAGATGGACTGAGGAACTGCATGAATCGTTCATGATGATCGTTGATCACCTCGGTGGTCCAGACAAAGCAAAGCCAAAGGCTATACTAGATATGATGAAATCGAATTCGCTGTCTCTTTCTCATGTTAAAAGTCATTTACAGAAATGTAGATCTTCGGAACGCGTGCATAAAGCTTTGCGAGAAAGATCTGAGGAAGGACATAGAACAGATAGAGTCACCGAGCTTCAACTCAAAATCCATATGCAAATTGAGGAATCGCGACAATTGCAACTAGAGGTTCGAAAGAGTATTTCACAACAGCTAGCGATGCAAAGAAGTTTGGAAACACTCATTGAAGAACATAGCGAGAAGCTCAAAGTAATGCAAAAAGAAAAAACCAACCAAAGAAAATCTTGGACACAACGAGAAATGACAGTTCCGAAATAA 1077 0.3677 MYQHWSRMYGTQWESYMGINNLVKVVESEQVMSFEPIKSTCNNIVTSSSNLETPYEGFGAVTIAKIKSSVGFQGGEYYDEDQIEVPDWCFDQFPKITDPPLLNCQGSGDNFTSSLYSVSKESLLSNNSADSHNSSEEEYSNFQSGNMSFYDHFPQNHDELMKNDASIDEKPFEISFQRIKSGTPTKSHKQSPQLYGIGCATSSNNASRKAIICKRRIRWTEELHESFMMIVDHLGGPDKAKPKAILDMMKSNSLSLSHVKSHLQKCRSSERVHKALRERSEEGHRTDRVTELQLKIHMQIEESRQLQLEVRKSISQQLAMQRSLETLIEEHSEKLKVMQKEKTNQRKSWTQREMTVPK 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03506 358 SUPERFAMILY Homeodomain-like 212 268 IPR009057 -
Trre14g03506 358 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 171 341 IPR044848 GO:0003700
Trre14g03506 358 MobiDBLite consensus disorder prediction 338 358 - -
Trre14g03506 358 Gene3D - 213 270 - -
Trre14g03506 358 Coils Coil 321 348 - -
Trre14g03506 358 NCBIfam myb-like DNA-binding domain, SHAQKYF class 214 268 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03506 Trre-Chr14 43591824 43593765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03506 199 338 G2-like Transcription Factor Family AT4G28610 40.845 1.98e-24 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Trre14g03506 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03506 - - tpra:123891582 626.706