Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03500 ATGTTTCCAGCCCCTGAGTCTCTTTTTGCACCGGAACTTATAGATGTTGAAGGTGTTGGAATGGCTGACATGGTGTTTCGCTGCATTCAAGAAATGGATATCGACAACCGGATGATGCTTTATCAACACATTGTTTTAAGTGGAGGGAGCACCATGTATCATGGATTACCAAGCCGATTGGAAAAAGAAATACTTGATCGTTATCTTGATGTTGTGTTGAAGGGCAATAAAGATGGACTGAAGGATGCACCAGAGTTTTGGATTAACAGGGAAGATTATCTAGAAGAAGGAATTGCTTGCCCGACTATCTTTTCCAAGTTTTTTCTTGAAGGAATCACTTTTTTTGCATGTACTCAAGTTGAAATGCCACCTTTGATGGACATTGAGGTAAAACGTCTATGA 402 0.4005 MFPAPESLFAPELIDVEGVGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYHGLPSRLEKEILDRYLDVVLKGNKDGLKDAPEFWINREDYLEEGIACPTIFSKFFLEGITFFACTQVEMPPLMDIEVKRL 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03500 133 Gene3D - 1 83 - -
Trre14g03500 133 SUPERFAMILY Actin-like ATPase domain 2 99 IPR043129 -
Trre14g03500 133 PANTHER ACTIN 2 97 IPR004000 -
Trre14g03500 133 Pfam Actin 2 67 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03500 Trre-Chr14 43501719 43505481 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03500 2 106 Cytoskeleton Gene Families AT5G09810 33.884 3.27e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03500 K17260 - gmx:100796648 177.948