Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03499 ATGTTTCCAGCCCCTGAGTCTCTTTTTGCACCGGAACTTATAGATGTTGAAGGTGTTGGAATGGCTGACATGGTGTTTCGCTGCATTCAAGAAATGGATATCGACAACCGGATGATGCTTTATCAACACATTGTTTTAAGTGGAGGGAGCACCATGTATCATGGATTACCAAGCCGATTGGAAAAAGAAATACTTGATCGTTATCTTGATGTTGTGTTGAAGGGCAATAAAGATGGACTGAAGAAATTACGATTAAGAATTGAGGATCCACCTCGTAGGAATAATGAAGCTATCTTTTCCAAGTTTTTTCTTGAAGGAATCACTTTTTTTGCATGTACTCAAGTTGAAATGCCACCTTTGATGGACATTGAGGTAAAACGTCTATGA 387 0.3902 MFPAPESLFAPELIDVEGVGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYHGLPSRLEKEILDRYLDVVLKGNKDGLKKLRLRIEDPPRRNNEAIFSKFFLEGITFFACTQVEMPPLMDIEVKRL 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03499 128 Gene3D - 19 96 - -
Trre14g03499 128 Gene3D Actin; Chain A, domain 4 2 18 - -
Trre14g03499 128 PANTHER ACTIN 2 82 IPR004000 -
Trre14g03499 128 Pfam Actin 2 67 IPR004000 -
Trre14g03499 128 SUPERFAMILY Actin-like ATPase domain 2 94 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03499 Trre-Chr14 43501719 43505481 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03499 2 110 Cytoskeleton Gene Families AT5G09810 32.110 6.30e-13 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03499 K17260 - cave:132183318 178.333