Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03479 ATGTTCCCAGCCCCTGAGTCTCTTTTCGCACCGGAACTTATAGATGTTGAAGGTGTTGGAATGACTGACATGGTGTTTCGCTGCATTCAAGAAATGGATATCGACAACCGGGTGATGCTTTATCAACACATTGTTTTAAGTGGAGGGAGCACCATGTGTCATGGATTACCAAGCCGATTGGAAAAAGAAATACTTGATCGTTATCTTGATGTTGTCTTGAAGGGCAATAAAGATGGACTGAAGGATGCACCAGAGTTTTGGATTAACAGGGAAGATTATCTAGAAGAAGGAATTGCTTGCCCGAGTAGCTATCTTTTCCAAGTTTTTTCTTGA 333 0.4174 MFPAPESLFAPELIDVEGVGMTDMVFRCIQEMDIDNRVMLYQHIVLSGGSTMCHGLPSRLEKEILDRYLDVVLKGNKDGLKDAPEFWINREDYLEEGIACPSSYLFQVFS 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03479 110 SUPERFAMILY Actin-like ATPase domain 2 99 IPR043129 -
Trre14g03479 110 PANTHER ACTIN 2 97 IPR004000 -
Trre14g03479 110 Pfam Actin 2 67 IPR004000 -
Trre14g03479 110 Gene3D - 1 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03479 Trre-Chr14 43356892 43360399 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03479 2 97 Cytoskeleton Gene Families AT5G09810 34.821 1.27e-12 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03479 K17260 - gmx:100803980 171.785