Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03451 ATGGCTGCTTCAAGTGTTAAAAATCTCAACCAAACCACTACTCAATTAGAACCACTCCCACCACAACAACAACATCATCATTTTCATCATCAACAACATCAACAACAACAACATCAACAACATCATCAAAATAATCAAATTTCTTTTGGAATGATGCAATCTTCTTCATCACCCTCTGTCCCAGGAAGCTACATAAATAATAAAGATTCAGGAGCTTATGATTTGGGAGAATTGGATCAAGCACTTTTTTTGTATCTTAATGGACAAAATGACCCAACTAGTGTTCATGAACAAAAACAGAATTCATCATCATCAGGAATGAGGCCTCCAACTCTTAACATTTTTCCTTCTCAACCTATGTACGTAGAGCCATCATCATCAAATTCTAAGGCTAGCATGGAGTTAATTTCTTCAGAAACAAGTGGATCGAAGAAAGGATCAGAGGCGCCGTCTATGGAATTAACTAATTCAAGAAAAGAAATTGCTTCTGGCTCTCAGCAACCCAAACCTATCAAGCAACGAGAAAGAAATCATGGCAAGGGTCCAACTTCAAGTTCTGAACATGAAGGACCTAAAACACCAGATCCTAAGACACTGAGAAGACTTGCTCAGAATAGAGAAGCAGCTAGAAAAAGCAGGCTTAGAAAAAAGGCATATATTCAACAACTAGAGTCAAGCAGAATCAAACTTAATCAGATGGAACAAGAGCTTCAGCGTGCTAGAAATCAAGGCATGTTCTTTGGTGGAGGTGCAATTTTGGGTGGTGAACAAGGTCTTCCTATTTCAATGAATGGCATTAGCTCAGAGGCTGCAATGTTTGATGTGGAATATGCAAGGTGGCTAGAGGAGCACCACCGTTTAGTGTGTGAACTAAGAGCTGCAATTCAAGAGCACATTCATGAAAATGATCTTAGAATGTTTGTGGACAAATTCTTAGCACAAATTGATCAATTAATGCATCTAAAAAGCTTAGTTGCAAAATCAGACATTTTTCATCTTGTTTCTGGTATGTGGGTTACCCCAGCTGAACGTTGCTTCATGTGGATTGGTGGATTCAAACCTTCTGAACTCATTAAGATTATTGTGAGTCAAATTGAGCCTGTAACCGAGCAACAAATAATGGGAATATATGGATTGCAACATTCTACACAACAAGGAGAAGATGCTCTCTCTCAAGGACTTGATGCTCTTAATCAATCTCTTTCAGAAACTATAACATCAGAATCATTGAGTTATCCTCCAAACATGAATAATTACATGGATCAAATGTCTAGGGCAATGAACAAGCTCTCCACTCTTGAAGGTTTCGTAAGAGAGGCGGATAATCTACGACACCAAACCATTCACCGCTTGAATCAGATCCTAACAACGCGTCAAGCAGCGAGGTGTTTTCTTGCCATGGCCGAGTACTTCCATCGTCTGCGAACCTTGAGTTCACTGTGGTTGGCACGCCCTCGTCAAGAATAG 1467 0.3967 MAASSVKNLNQTTTQLEPLPPQQQHHHFHHQQHQQQQHQQHHQNNQISFGMMQSSSSPSVPGSYINNKDSGAYDLGELDQALFLYLNGQNDPTSVHEQKQNSSSSGMRPPTLNIFPSQPMYVEPSSSNSKASMELISSETSGSKKGSEAPSMELTNSRKEIASGSQQPKPIKQRERNHGKGPTSSSEHEGPKTPDPKTLRRLAQNREAARKSRLRKKAYIQQLESSRIKLNQMEQELQRARNQGMFFGGGAILGGEQGLPISMNGISSEAAMFDVEYARWLEEHHRLVCELRAAIQEHIHENDLRMFVDKFLAQIDQLMHLKSLVAKSDIFHLVSGMWVTPAERCFMWIGGFKPSELIKIIVSQIEPVTEQQIMGIYGLQHSTQQGEDALSQGLDALNQSLSETITSESLSYPPNMNNYMDQMSRAMNKLSTLEGFVREADNLRHQTIHRLNQILTTRQAARCFLAMAEYFHRLRTLSSLWLARPRQE 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03451 488 SUPERFAMILY Leucine zipper domain 198 241 IPR046347 GO:0003700|GO:0006355
Trre14g03451 488 FunFam BZIP family transcription factor 196 245 - -
Trre14g03451 488 MobiDBLite consensus disorder prediction 92 199 - -
Trre14g03451 488 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 195 239 IPR004827 GO:0003700|GO:0006355
Trre14g03451 488 Gene3D - 196 245 - -
Trre14g03451 488 CDD bZIP_HBP1b-like 197 249 - -
Trre14g03451 488 Pfam bZIP transcription factor 197 233 IPR004827 GO:0003700|GO:0006355
Trre14g03451 488 Pfam Seed dormancy control 288 363 IPR025422 GO:0006351|GO:0043565
Trre14g03451 488 ProSiteProfiles DOG1 domain profile. 270 484 IPR025422 GO:0006351|GO:0043565
Trre14g03451 488 SMART brlzneu 193 279 IPR004827 GO:0003700|GO:0006355
Trre14g03451 488 MobiDBLite consensus disorder prediction 171 199 - -
Trre14g03451 488 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 200 215 IPR004827 GO:0003700|GO:0006355
Trre14g03451 488 MobiDBLite consensus disorder prediction 16 43 - -
Trre14g03451 488 PANTHER TRANSCRIPTION FACTOR TGA9 137 487 - -
Trre14g03451 488 Coils Coil 216 243 - -
Trre14g03451 488 MobiDBLite consensus disorder prediction 92 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03451 Trre-Chr14 43159055 43165693 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03451 62 488 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 60.802 0.0 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre14g03451 DOG1 3.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03451 K14431 - gmx:100815176 699.893