Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03391 ATGGGGCGGAACAAGAAAGCTAGGGTTTCTGATGATGAAGAAATCGAAGATCAACCTCAAAAGACTCTCTACCAGGTTCTTGGTTTGGAGAAAACTGCTTCTCAACAGGAAATAAAGAAGGCTTATTACAAATTGGCATTGCGGCTTCATCCGGATAAGAATCCGGGTGATGAGGAGGCTAAAGAGAAATTCCAGCAACTGCAAAAAGTTATTTCCATTCTTGGAGACGAAGAGAAACGAGCCATCTATGATGAGACTGGTTGTATTGATGATGATGATCTTGCAGGAGATGTTCAGAATCTTCATAAGTTTTTCAGAACAATGTACAAGAAGGTTACTGAAGCTGAAATTGAAGAATTTGAAGCAAACTACAGGGGATCTGATTCAGAGAAAAATGATTTGATTGAGCTGTACAAGAAGCACAAGGGGAATATGAACAGGCTTTTTTGTTCAATGCTTTGTTCAGATGCTAAACTTGACTCACACCGATTCAAAGATATTCTTGATGAGGCTATAGCTGCTGGAGAACTAAAGGCAACAAAAGCCTACCAGAAATGGGCTAAGGAAGTATCAGAAATCAAACCGCCCACAAGTCCTTTACGGAGGAGGGCAAAGTCAAATAAGCAGCCTGAAACAGATCTATATGCAGTCATAGCACAACGCCGAAACGAGAGGAAAGGCCAGTTTGATTCAATGTTCTCATCTTTAGTATCGAAGTATGGTGGAGGTGACTTGCCAGAACCTTCTGAAGAGGAATTTGAAGCTGCACAGAAAAAGTTGGAGAAGGGAAGATCCTCAAAAAAATCAAAGCAATCAAAAGGAAAGTAA 828 0.4058 MGRNKKARVSDDEEIEDQPQKTLYQVLGLEKTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRAIYDETGCIDDDDLAGDVQNLHKFFRTMYKKVTEAEIEEFEANYRGSDSEKNDLIELYKKHKGNMNRLFCSMLCSDAKLDSHRFKDILDEAIAAGELKATKAYQKWAKEVSEIKPPTSPLRRRAKSNKQPETDLYAVIAQRRNERKGQFDSMFSSLVSKYGGGDLPEPSEEEFEAAQKKLEKGRSSKKSKQSKGK 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03391 275 SUPERFAMILY Chaperone J-domain 21 91 IPR036869 -
Trre14g03391 275 CDD DnaJ 22 76 IPR001623 -
Trre14g03391 275 MobiDBLite consensus disorder prediction 194 213 - -
Trre14g03391 275 ProSiteProfiles dnaJ domain profile. 22 87 IPR001623 -
Trre14g03391 275 SMART dnaj_3 21 79 IPR001623 -
Trre14g03391 275 MobiDBLite consensus disorder prediction 240 275 - -
Trre14g03391 275 Pfam DnaJ domain 23 84 IPR001623 -
Trre14g03391 275 MobiDBLite consensus disorder prediction 195 209 - -
Trre14g03391 275 Gene3D DnaJ domain 7 102 IPR036869 -
Trre14g03391 275 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 13 271 IPR042977 -
Trre14g03391 275 PRINTS DnaJ domain signature 42 57 IPR001623 -
Trre14g03391 275 PRINTS DnaJ domain signature 79 98 IPR001623 -
Trre14g03391 275 PRINTS DnaJ domain signature 24 42 IPR001623 -
Trre14g03391 275 PRINTS DnaJ domain signature 59 79 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03391 Trre-Chr14 42423153 42425667 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03391 24 84 C2H2 Transcription Factor Family AT1G74250 40.909 4.23e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03391 K09529 - gmx:100793909 448.743