Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03386 ATGTTGATTCCACCACCACCTACAAATCAATCTCTGAATGAGAACTGCAGAAGGTGTGCATGCTGGATTCAAGGGAGCTCAAGAAAATCAAGAGGATTAAAGAAGCATTTGAAGAGGCTCAAAGCCCCCAAGCATCGGATGCTTGACAAATTGGGTGGTGCTTTTGTGGAGGCGATATTAGACAAGGATAATTTCACTTTAGAAGAGCTTCTACATGAAGAGGAAGTAATCCAAGAATGCAAGTTCATGACACACATTGGGATGAAGTATTGTCACTGCACTCCTCCCTTCAGATTTCAATTAACAAAGAACACTGTCGAATCTGAATATTCTGCTAATTAA 342 0.4064 MLIPPPPTNQSLNENCRRCACWIQGSSRKSRGLKKHLKRLKAPKHRMLDKLGGAFVEAILDKDNFTLEELLHEEEVIQECKFMTHIGMKYCHCTPPFRFQLTKNTVESEYSAN 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03386 113 Gene3D - 29 64 IPR036986 GO:0003723
Trre14g03386 113 Pfam RS4NT (NUC023) domain 31 56 IPR013843 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03386 Trre-Chr14 42343779 42345972 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03386 30 55 Cytoplasmic Ribosomal Protein Gene Family AT2G17360 88.462 4.12e-09 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03386 K02987 - thj:104823372 50.8322