Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03343 ATGGATATGCTTCAAAAGGAGTGTCTCCTTAGGTTAGGATTGTTGCTATGTGTTTCATTTGGCTTCTTGCTACATCCTGTTGTAACAGCTGTAATACCATTAGGTTCCAAACTTTCTGTGGTTGATAATGATTGTTGGGTTTCCTCCAATGGTGATTTTGCATTCGGGTTCTTTAACATTACTGATGAACCTAACCAGTTTAGTGTCGGCATTCGTTTCAATTCAAAGTCTATTCCTTATAGTCAGCAAACACTTGTATGGATTGCTGGTGCTCATGTCAAAGTAAGCAACATGTCCTATTTCCAACTCACTCCACAAGGGGAACTTGTCTTGTTTGATTCCTTACACGGAATCACTGTGTGGAGCAGTCAAACAGGAAATCGATATGTTGTTTCGGCCGCGCTTCATGACAATGGAAATCTTGTTCTGATAGACACAAAACAAAACATCATTTGGCAAAGTTTTGATACTCCTTCTGATACACTTCTCCCAGGACAGAGTTTATCTGTTTACAAGACGCTTCGTGCTTCAACCAAGGACCCTCAGAGTAGTTACTACAGTCTTTACATGAATGCTTCTGGTCGGTTACAGCTTCGTTGGGAGAGTAATATTGTATACTGGACTAGTGAAATCCCTTCTACTGCAAATCTCACTGCATTCCTTACAACCGATGGATCTCTTCAACTTCGAGACCAAAAATTTAAATCTGTTTGGAGTGTATTTGGAGCAGACCACAATGATTCTGTGAGTTATCGATTTCTCAGGCTAGATTTGGATGGCAATCTCCGGTTATACTCATGGACAGAAGCTTCACAATCATGGAGATCTGTTTGGCAAGCTGTGGAGAATCAATGCAAAGTCTTTGCTACATGTGGCCAACGCGGTGTCTGTGTCTTCAATGCTTCAGGTTCTGCCGAGTGCAGGTGCCCTTTCAAGGTAACTGATACTAACAATTGTTTGGTTCTGTATGAACGTGACTGTGCTTCTGGCATCAATATGCAACAATATAAGAACATATATCTATATGGAATTTACCCTCCTGATGATTCTGTCATCACAAGTAGTTTGCAGCAATGCGAACATTTGTGCCTGAAGGACTCTCGGTGTACGGTTGCAACCTTTTCCAACAATGGTAGTCCACAATGCTCCATAAAGAAAACTAATTACATAACTGGCTACGAAGATCCATCTCTAAGCTCAATATCATTTGTTAAGAGCTGCTCAGCTCCATTTGCAGTAGATCCTGGTCTCAAGAAGTCGCCTCCATCGAAACCATCACCTCGGAGGCTCTGTGTTCGTTGCATGGTAGGGGCAGCCTCAGGAACATTTGTGATCGTTGCTTTTGTCCAGCTGGGAATTGTTTTTTTCATCTGTAGAAGAAAAAGCTATACTATGAGAAGAGTTACGTTAGCATTCACATTCCCGGATTCAAAAGGCTTAATGGTGTTATCCTCTGCAGAAATCAAGAGCATCACCGGAGATTTTAAGAATCGAATAGGGCCAAATATGTTCAAGGGTGTGCTACCGAGCAATTGTCTGGTTGCAATCAAAGACCTGAATGCATCCATAGAAGAAAGGAAATTCCGGAGCGCTGTTCTGAAGATAGGGAGAATCCACCACAAGAACCTAGTGAAGCTGGAGGGCTATTGTTGTGAGTTCAATAATCGATATTTGGTGTTTGAATTTTCCAAAGCCGGTTCATTGGACAAGTACTTAGATGACTCTACTCTTTGCAAGAGGCTAACTTGGAGAAACAGAATTGAAATATGCTCGAGTGTGGCGAAGGCCATCTGTTATTTGCATTCGGGGTGCAGGGAATTTATTAGCCACGGAAATTTGAAATGTGAGAATGTGATGTTGGATGATGATTCAGTCGCTAAGGTATCTGAATATGGATTTGCAATAGTCAATGGCGAGGCTACATACTGCGGTTTTTCAGCTGAAAAAGATGTAGGAGATTTTGGCAAATTAGTACTAACCTTGTTAACCGGGCAGCAAGATCACGAACAAGTTTGTGAATGGGCTTACGAAGAATGGATGGAAGGAAGGGTAGCTAATGTGGTTGATAAGAGAATCGAAGGTGGTGCTAATTCAGAAGAACTCGAACGTGCGTTAAGAATCGCATTCTGGTGCATTCAAATGGACGAACATAAAAGACCATCGATGGAAGAGGTAGCGAGAGTACTAGATGGTACATTGAATGTTGATCCACCACCATCTCCATTTCATTTGCCTTGTAATCCACAAGAAAATGGTTCAGAATCAGAACTAGAATCAGTGGTTTAG 2286 0.4173 MDMLQKECLLRLGLLLCVSFGFLLHPVVTAVIPLGSKLSVVDNDCWVSSNGDFAFGFFNITDEPNQFSVGIRFNSKSIPYSQQTLVWIAGAHVKVSNMSYFQLTPQGELVLFDSLHGITVWSSQTGNRYVVSAALHDNGNLVLIDTKQNIIWQSFDTPSDTLLPGQSLSVYKTLRASTKDPQSSYYSLYMNASGRLQLRWESNIVYWTSEIPSTANLTAFLTTDGSLQLRDQKFKSVWSVFGADHNDSVSYRFLRLDLDGNLRLYSWTEASQSWRSVWQAVENQCKVFATCGQRGVCVFNASGSAECRCPFKVTDTNNCLVLYERDCASGINMQQYKNIYLYGIYPPDDSVITSSLQQCEHLCLKDSRCTVATFSNNGSPQCSIKKTNYITGYEDPSLSSISFVKSCSAPFAVDPGLKKSPPSKPSPRRLCVRCMVGAASGTFVIVAFVQLGIVFFICRRKSYTMRRVTLAFTFPDSKGLMVLSSAEIKSITGDFKNRIGPNMFKGVLPSNCLVAIKDLNASIEERKFRSAVLKIGRIHHKNLVKLEGYCCEFNNRYLVFEFSKAGSLDKYLDDSTLCKRLTWRNRIEICSSVAKAICYLHSGCREFISHGNLKCENVMLDDDSVAKVSEYGFAIVNGEATYCGFSAEKDVGDFGKLVLTLLTGQQDHEQVCEWAYEEWMEGRVANVVDKRIEGGANSEELERALRIAFWCIQMDEHKRPSMEEVARVLDGTLNVDPPPSPFHLPCNPQENGSESELESVV 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03343 761 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 28 157 - -
Trre14g03343 761 PIRSF SRK 1 643 IPR024171 GO:0004674
Trre14g03343 761 PIRSF SRK 640 760 IPR024171 GO:0004674
Trre14g03343 761 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 642 737 - -
Trre14g03343 761 Gene3D Hepatocyte Growth Factor 335 409 - -
Trre14g03343 761 MobiDBLite consensus disorder prediction 739 761 - -
Trre14g03343 761 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 459 562 - -
Trre14g03343 761 CDD B_lectin 47 158 IPR001480 -
Trre14g03343 761 Pfam Protein tyrosine and serine/threonine kinase 511 635 IPR001245 GO:0004672|GO:0006468
Trre14g03343 761 Gene3D - 158 276 IPR036426 -
Trre14g03343 761 SMART ntp_6 328 406 IPR003609 -
Trre14g03343 761 ProSiteProfiles PAN/Apple domain profile. 327 407 IPR003609 -
Trre14g03343 761 ProSiteProfiles Bulb-type lectin domain profile. 159 277 IPR001480 -
Trre14g03343 761 SUPERFAMILY Protein kinase-like (PK-like) 503 729 IPR011009 -
Trre14g03343 761 SUPERFAMILY alpha-D-mannose-specific plant lectins 176 276 IPR036426 -
Trre14g03343 761 PANTHER OS07G0415500 PROTEIN 14 742 - -
Trre14g03343 761 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 158 276 - -
Trre14g03343 761 ProSiteProfiles Protein kinase domain profile. 432 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g03343 761 SUPERFAMILY alpha-D-mannose-specific plant lectins 87 171 IPR036426 -
Trre14g03343 761 ProSiteProfiles Bulb-type lectin domain profile. 31 156 IPR001480 -
Trre14g03343 761 Gene3D Phosphorylase Kinase; domain 1 459 562 - -
Trre14g03343 761 Pfam S-locus glycoprotein domain 245 309 IPR000858 GO:0048544
Trre14g03343 761 Gene3D Transferase(Phosphotransferase) domain 1 564 736 - -
Trre14g03343 761 Pfam D-mannose binding lectin 84 173 IPR001480 -
Trre14g03343 761 Gene3D - 32 157 IPR036426 -
Trre14g03343 761 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 563 641 - -
Trre14g03343 761 SMART blect_4 37 158 IPR001480 -
Trre14g03343 761 MobiDBLite consensus disorder prediction 746 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03343 Trre-Chr14 42030796 42033081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03343 447 729 Receptor kinase-like Gene Family AT3G45860 28.834 1.20e-36 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre14g03343 PK_Tyr_Ser-Thr 2.2e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03343 - - gmx:100809478 1208.36