Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03337 ATGGGAAATTGCTGTGCTACCCCTGCTGTAGCTGGAGAAGAAACAACAAACAAGAAAAACAAAAAGGGCAAAAAAGAGAATCCATTCGCAATCGATTACGCTTTCAACAACAACAACACCGCATCAAAACTAACCGTTTTGAAAGATCCAACAGGTAGAGAAATCGAGAATCGTTACGAGCTAGGTAGAGAACTAGGAAGAGGTGAATTCGGTGTAACGTATTTATGTACAGATAAAGAAACTAGAGAAGAACTAGCTTGTAAGTCGATATCGAAGAAGAAACTTAGAACTGCAATTGATATTGAAGATGTTAGAAGAGAAGTTGAAATTATGAGACATATGCCACAGCATAATAATATTGTTACGTTGAAAGATACTTATGAAGATGATAATGCTGTTCATCTTGTTATGGAACTTTGTGAAGGTGGTGAACTTTTTGATCGGATTGTTGCTAGAGGTCATTATACTGAACGTGCTGCTGCTGCTGTTACCAAAACTATTGTTGAAGTTGTTCAGATGTGCCACAAACATGGTGTGATGCATAGGGATCTCAAGCCAGAGAACTTTTTGTTTGCAAATAAGAAGGAAACGGCAGCATTGAAAGCTATCGATTTTGGATTGTCAGTGTTCTTTAAACCAGGTGAAAGATTTAATGAGATAGTTGGAAGTCCATATTACATGGCTCCTGAGGTATTGAAGAGAAATTATGGCCCAGAAGTTGATATCTGGAGTGCTGGAGTTATTCTATACATCTTACTTTGTGGTGTCCCTCCATTTTGGGCAGAAACTGAGCAAGGAGTGGCACAAGCAATTATACGATCTGTTGTTGATTTCAAAAGGGACCCATGGCCAAAGGTTTCTGATAATGCAAAAGACCTTGTGAAGAAGATGCTCAATCCTGACCCAAAGCGGCGACTTACTGCACAAGAAGTGTTAGATCATCCATGGTTAATAAATGCAAAGAAAGCTCCCAATGTTTCGTTAGGAGAAACAGTTAGAGCAAGGCTAAAGCAGTTTTCCGTAATGAATAAGCTTAAGAAAAGAGCTTTGAGGGTTATTGCAGAGCATTTGTCAGTAGAAGAAGCTGCTGGACTAAAAGAGGGATTCAAGCTTATGGATACAAGCAACAATGGCAAGATCAACATTGATGAACTACGAGTAGGGTTGCATAAACTAGGCCATCAAATTCCTGATGCTGATGTCCAAATTCTTATGGAAGCTGGTGATGTAGATAGGGATGGATACCTAGATTACGGGGAGTATGTAGCCATTTCTGTTCATCTGAGAAAAATGGGAAATGATGAGCACCTTCATAAAGCCTTTGATTTTTTCGATCAAAACCAAAGTGGGTATATTGAGATGGAGGAACTGCGCGATGCCTTATCTGATGAAATCGAAACAAACAGTGAAGAAGTCATTAATGCAATTATGCATGATGTGGACACAGATAAGGACGGAAAGATAAGTTACGAGGAATTTACGAATATGATGAAGGCTGGTACAGATTGGAGAAAGGCATCAAGGCAGTATTCGCGAGAAAGGTTTAACAGTTTGAGCCTGAAATTGATGAAGGACGGATCATTGCAATTAAACAATGAAAGCAGTGAAGGCAGATGA 1617 0.3933 MGNCCATPAVAGEETTNKKNKKGKKENPFAIDYAFNNNNTASKLTVLKDPTGREIENRYELGRELGRGEFGVTYLCTDKETREELACKSISKKKLRTAIDIEDVRREVEIMRHMPQHNNIVTLKDTYEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTKTIVEVVQMCHKHGVMHRDLKPENFLFANKKETAALKAIDFGLSVFFKPGERFNEIVGSPYYMAPEVLKRNYGPEVDIWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVVDFKRDPWPKVSDNAKDLVKKMLNPDPKRRLTAQEVLDHPWLINAKKAPNVSLGETVRARLKQFSVMNKLKKRALRVIAEHLSVEEAAGLKEGFKLMDTSNNGKINIDELRVGLHKLGHQIPDADVQILMEAGDVDRDGYLDYGEYVAISVHLRKMGNDEHLHKAFDFFDQNQSGYIEMEELRDALSDEIETNSEEVINAIMHDVDTDKDGKISYEEFTNMMKAGTDWRKASRQYSRERFNSLSLKLMKDGSLQLNNESSEGR 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03337 538 PANTHER SERINE/THREONINE-PROTEIN KINASE 52 493 - -
Trre14g03337 538 Pfam EF-hand domain pair 435 498 IPR002048 GO:0005509
Trre14g03337 538 CDD STKc_CAMK 58 316 - -
Trre14g03337 538 Coils Coil 451 471 - -
Trre14g03337 538 FunFam Calcium-dependent protein kinase 1 61 144 - -
Trre14g03337 538 ProSitePatterns Protein kinases ATP-binding region signature. 65 88 IPR017441 GO:0005524
Trre14g03337 538 ProSiteProfiles Protein kinase domain profile. 59 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g03337 538 Pfam EF-hand domain pair 384 425 IPR002048 GO:0005509
Trre14g03337 538 ProSitePatterns EF-hand calcium-binding domain. 481 493 IPR018247 -
Trre14g03337 538 FunFam Calcium-dependent protein kinase 7 326 501 - -
Trre14g03337 538 Gene3D - 326 500 - -
Trre14g03337 538 ProSitePatterns EF-hand calcium-binding domain. 445 457 IPR018247 -
Trre14g03337 538 Gene3D Phosphorylase Kinase; domain 1 61 144 - -
Trre14g03337 538 SUPERFAMILY Protein kinase-like (PK-like) 43 330 IPR011009 -
Trre14g03337 538 ProSiteProfiles EF-hand calcium-binding domain profile. 468 503 IPR002048 GO:0005509
Trre14g03337 538 SMART efh_1 364 392 IPR002048 GO:0005509
Trre14g03337 538 SMART efh_1 436 464 IPR002048 GO:0005509
Trre14g03337 538 SMART efh_1 472 500 IPR002048 GO:0005509
Trre14g03337 538 SMART efh_1 400 428 IPR002048 GO:0005509
Trre14g03337 538 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Trre14g03337 538 Gene3D Transferase(Phosphotransferase) domain 1 145 325 - -
Trre14g03337 538 ProSiteProfiles EF-hand calcium-binding domain profile. 360 395 IPR002048 GO:0005509
Trre14g03337 538 Pfam Protein kinase domain 59 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g03337 538 ProSitePatterns EF-hand calcium-binding domain. 409 421 IPR018247 -
Trre14g03337 538 FunFam calcium-dependent protein kinase 13 145 325 - -
Trre14g03337 538 CDD EFh 436 498 IPR002048 GO:0005509
Trre14g03337 538 ProSitePatterns EF-hand calcium-binding domain. 373 385 IPR018247 -
Trre14g03337 538 SUPERFAMILY EF-hand 341 510 IPR011992 -
Trre14g03337 538 ProSiteProfiles EF-hand calcium-binding domain profile. 432 467 IPR002048 GO:0005509
Trre14g03337 538 SMART serkin_6 59 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03337 Trre-Chr14 41949170 41952746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03337 1 534 EF-hand Containing Proteins AT5G19450 79.478 0.0 900
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Trre14g03337 Pkinase 4e-78 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03337 K13412 - gmx:100790745 948.347