Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03326 ATGGAAATTTTGTGCTTGTTGCATATTGTGTTAGGTTGGTATCTTTCAAATGTTGAGTTTGTTGTAGGTGCTGAGTTACAGGACCAAGCTATAATACATGCAATCAATCAAGAGCTTAGAGTTCCTGAATGGAGTGATGCAAACATTTCAGATTACTGTAGTTGGCAAGGTGTTTTCTGTAGCAATCATTCAATGGTGGAGAAGCTTGATCTTTCTCACAAGAACCTTAGAGGTAATGTGACTTTAATGTCTGAACTCAAAAGTTTGAAGTTACTTGACCTTTCAAATAATAACTTTGGTGGATTTATTCCTCTTGCTTTTGGAACTTTATCTGAGCTTGAAGTTCTAGATTTGTCTTCTAATAAGTTTGAAGGTTCAATTCCATCACAGTTTGGTGGTCTCAAAAGCTTAAAATCATTAAACCTTTCTAATAATTTGCTTGTTGGTGAGTTTCCAATTGAACTTCATGGCTTAAAGAAATTGCAGGATTTGCAACTTTCTAGTAATCAATTGAGTGGTTTTATACCTTCTTGGGTGGGGAATTTAACCAATTTGAGAGTTTTTTCGGCTTATGAGAACCGTTTAGATGGTAGAATTCCAGATAATCTAGGCTTGATTCCTGAACTTCAGATACTTAACCTGCATTCTAACCAGCTTGAAGGTCCAATACCATCGAGCATTTTCGCTTCGGGAAAGCTAGAAGTTCTGGTTCTCACACAGAATAATTTTAGTGGGGATCTTCCTGAGGAAATTGGGAACTGTCATGCCCTTTCAAGCATTAGAATTGGAAACAACCATCTTGTAGGTAGCATTCCTAAGACCATTGGAAATCTTAGTAGCCTAACTTACTTTGAAGCCGATAATAATAATCTTTCTGGTGAGCTAGTGTCGGAATTTGCTCGGTGTTCTAACCTCACCCTCTTGAATTTAGCTTCAAATGGATTTTCTGGGACGATTCCGCAGGAGTTTGGACAACTTATGAACCTTCAGGAATTAATTTTGTCTGGAAATAGCCTATTTGGTGATATTCCAAAACCAATTCTCAGTTGCAAAAGTCTCAACAAGCTGGATATTAGCAACAACAGATTCAACGGGACAATACCGAGTGGAATCTGCAACATTTCTCGGTTGCAGTACTTGATATTGAATCTGAATTCCATAAGAGGAGAGATCCCTCACGAAATTGGAAGTTGTGCAAAACTTCTTGAGTTGCAATTGGGGAGTAATTATTTGACTGGAACTATTCCTCCTGAGATCGGCCGCATCAGGAACTTACAGATAGCTTTAAATTTGAGCTTCAATCATCTCCATGGATCACTTCCGCCAGAATTGGGAAAACTCGACAAACTTGTTTCTCTCGATGTTTCAAACAACCGGCTATCAGGTAATATCCCAGCTGAGCTTAAGGGAATGTTGAGCTTGATAGAGGTGAATTTCTCGAATAATCTGTTGGAGGGTCCTGTACCAACATTCATTCCATTCCAGAAAAGTCCTACTTCGAGTTTTTTAGGCAATATAGGGCTTTGTGGAGATCCATTGAACTCTTCATGTGGAGATATTTATGATGATCACAATAGTTACCATCACAAGGTTTCTTACAGAATCATACTGGCCGTAATTGGTTCTGGTTTGGCAGTTTTTGTGTCGGTAACAATAGTTGTCATGCTGTTTATGATCAGAGAGAGGCAAGAAAAAGCAGCCAAAGAGGCTGCCGGTATTGTTGATGATCCAACCAATGACAAACCAACTATAATAGCAGGGACTGTTTTTGTCGATAATCTAAAACAAGCAGTAGACCTTGAAGCCGTTGTTAACGCAACAATGAAAGACTCGAATAAGATCAGCAGTGGAACTTTCAGCTCAGTTTACAAAGCAACCATGCCTTCTGGTGTGGTCTTATCGGTTAGGAGACTGAAATCTTTGGACAAGACAATAATCCACCATCAGAACAAGATGATTCGAGAACTTGAAAGGCTAAGCAAAGTTTGTCACGATAATCTTGTGCGACCTATTGGCTATGTCATTTACGAAGATGTTGCTCTTCTCTTGCATAATTATTTTCCTAATGGAACATTATCTCAGCTTCTTCATGAATCTACCAAGCAACCTGAATATCAGCCTGATTGGCCAGCTAGGCTATCCATTGCCATTGGTGTCGCAGAAGGTTTGGCTTTCCTTCATCATGTCGCAATTATCCATCTTGACATTTCTTCTGGAAATGTTCTTTTGGATGCAAATTTCAAGCCATTGGTTGGAGAGATTGAGATTTCAAAACTTTTGGATCCAACCAGAGGCACCGGAAGTATTAGCGCAGTTGCAGGTTCCTTCGGTTACATACCACCAGAATATGCATACACCATGCAAGTGACAGCACCAGGAAATGTTTACAGCTATGGTGTTGTTTTGCTAGAAATCCTTACAACTCGACAACCTGTTGAAGAAGATTTTGGCGAAGGTGTAGATTTGGTGAAGTGGGTTCATAGTGCTCCTGTAAGAGGGGAAACTCCGGAGCAGATACTTGATGCAAGACTTAGCACAGTTTCCTTTGGTTGGAGGAAAGAAATGCTTGCTGCTCTAAAGGTTGCGTTGCTTTGCACCGACAACACACCAGCCAAACGACCAAAAATGAAGAATGTTGTAGAAATGCTACGAGAAATCAAGTAA 2664 0.3979 MEILCLLHIVLGWYLSNVEFVVGAELQDQAIIHAINQELRVPEWSDANISDYCSWQGVFCSNHSMVEKLDLSHKNLRGNVTLMSELKSLKLLDLSNNNFGGFIPLAFGTLSELEVLDLSSNKFEGSIPSQFGGLKSLKSLNLSNNLLVGEFPIELHGLKKLQDLQLSSNQLSGFIPSWVGNLTNLRVFSAYENRLDGRIPDNLGLIPELQILNLHSNQLEGPIPSSIFASGKLEVLVLTQNNFSGDLPEEIGNCHALSSIRIGNNHLVGSIPKTIGNLSSLTYFEADNNNLSGELVSEFARCSNLTLLNLASNGFSGTIPQEFGQLMNLQELILSGNSLFGDIPKPILSCKSLNKLDISNNRFNGTIPSGICNISRLQYLILNLNSIRGEIPHEIGSCAKLLELQLGSNYLTGTIPPEIGRIRNLQIALNLSFNHLHGSLPPELGKLDKLVSLDVSNNRLSGNIPAELKGMLSLIEVNFSNNLLEGPVPTFIPFQKSPTSSFLGNIGLCGDPLNSSCGDIYDDHNSYHHKVSYRIILAVIGSGLAVFVSVTIVVMLFMIRERQEKAAKEAAGIVDDPTNDKPTIIAGTVFVDNLKQAVDLEAVVNATMKDSNKISSGTFSSVYKATMPSGVVLSVRRLKSLDKTIIHHQNKMIRELERLSKVCHDNLVRPIGYVIYEDVALLLHNYFPNGTLSQLLHESTKQPEYQPDWPARLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDANFKPLVGEIEISKLLDPTRGTGSISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRQPVEEDFGEGVDLVKWVHSAPVRGETPEQILDARLSTVSFGWRKEMLAALKVALLCTDNTPAKRPKMKNVVEMLREIK 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03326 887 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 280 887 - -
Trre14g03326 887 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 578 686 - -
Trre14g03326 887 ProSiteProfiles Protein kinase domain profile. 608 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g03326 887 Pfam Leucine rich repeat 112 171 IPR001611 GO:0005515
Trre14g03326 887 Gene3D Ribonuclease Inhibitor 27 175 IPR032675 -
Trre14g03326 887 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 57 227 - -
Trre14g03326 887 SUPERFAMILY L domain-like 38 293 - -
Trre14g03326 887 ProSitePatterns Tyrosine protein kinases specific active-site signature. 731 743 IPR008266 GO:0004672|GO:0006468
Trre14g03326 887 Gene3D Transferase(Phosphotransferase) domain 1 687 887 - -
Trre14g03326 887 Gene3D Ribonuclease Inhibitor 229 519 IPR032675 -
Trre14g03326 887 Gene3D Phosphorylase Kinase; domain 1 578 686 - -
Trre14g03326 887 Pfam Leucine Rich Repeat 88 108 IPR001611 GO:0005515
Trre14g03326 887 CDD STKc_IRAK 614 886 - -
Trre14g03326 887 Gene3D Ribonuclease Inhibitor 176 228 IPR032675 -
Trre14g03326 887 SMART LRR_typ_2 374 398 IPR003591 -
Trre14g03326 887 SMART LRR_typ_2 86 109 IPR003591 -
Trre14g03326 887 SMART LRR_typ_2 326 350 IPR003591 -
Trre14g03326 887 SMART LRR_typ_2 447 470 IPR003591 -
Trre14g03326 887 SMART LRR_typ_2 134 157 IPR003591 -
Trre14g03326 887 SMART LRR_typ_2 110 133 IPR003591 -
Trre14g03326 887 SMART LRR_typ_2 206 230 IPR003591 -
Trre14g03326 887 SMART LRR_typ_2 158 182 IPR003591 -
Trre14g03326 887 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 228 520 - -
Trre14g03326 887 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 687 887 - -
Trre14g03326 887 SUPERFAMILY Protein kinase-like (PK-like) 609 884 IPR011009 -
Trre14g03326 887 Pfam Protein tyrosine and serine/threonine kinase 611 883 IPR001245 GO:0004672|GO:0006468
Trre14g03326 887 SUPERFAMILY L domain-like 255 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03326 Trre-Chr14 41824971 41827722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03326 1 887 Receptor kinase-like Gene Family AT2G41820 71.991 0.0 1285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre14g03326 PK_Tyr_Ser-Thr 3.4e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03326 - - adu:107492611 1504.96