Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03273 ATGGGAACCGCTTCAAGACAGTTAAAGGTTATGCTCAGAAAAAATTGGCTCCTCAAAAAACGCCACCCGTTCATTACTGCTGCTGAGATTTTGCTACCGGCGATTGTGTTGTTGCTATTAGCAGCTGTAAGAACGCGAGTCGATACACAAATTCATCCTGCTCAATCGCACATTCAGAAAGATATGTTTGTAGAAGTGGGGAAAGGTATATCCCCTAACTTTCAACAAGTTTTGGAATCCTTATTGGATAAGAGAGAATATTTAGCTTTTGCACCAGACACCAATGAAACAAGGAGGATGATAGACGTCGTGTCGATCAATTTTCCGATTTTGAAGCTTGTTAGTATTGTATACAAAGATGAGTTAGAGTTGGAAACATACATCCGATCAGATGCTTATGGTACCTGCAGTGACGTAAGGAATTGTTCGAATCCCAAAATTAAAGGGGCAATTGTATTTTACGAACAAGGTCCTCAGTTATTTGATTATAGCATACGCCTCAATCATACATGGGCTTTCTCCGGTTTTCCGGATGTTACAACAATAATGGATACAAATGGCCCTTTTCTTAATGACTTGGAACTTGGTGTTAGCTCTGTACCAACAATGCAGTACAGCTTCAGTGGATTTTTGACACTCCAGCAAATGGTTGATTCGTTCATAATATTAACGACTCAACAACCTGAATTACAGTCAAATGCCAAAACTGTAAAACTTCCTCTTCTAGAACTTAGTGACACTGATTTCTCCCTAAAAGTTCCATGGACTCAGTTTATCCCTACCAACATACGAATAGCTCCATTTCCCACTCGAGAGTACACTGATGACCAGTTCCAGGCAATAGTGAAGGAAGTCATGGGAATATTGTATTTACTGGGGTTTCTCTATCCAGTTTCTCGCCTGATAAGTTATTCTGTGTTTGAGAAGGAACAAAAGATCAAAGAAGGACTCTATATGATGGGCTTAAAAGATGGCATATTTCATCTCTCTTGGTTTATCACATATGCTTTGCAGTTTGCAATTTCTTCTGCGGTCATTACAGCTTGCACCATGGATAATATATTCAAGTATAGCGATAAGACACTGGTGTTTGCATACTTCTTCATTTTTGGGCTTAGTGCAATCATGCTGTCATTTTTTATATCAACATTTTTCAAAAGGGCCAAAACAGCTGTAGCTGTTGGAACTATGTCATTTCTTGGTGCCTTTTTACCTTATTACACTGTCAACGATGAGGGAGTCTCTATGATCTTGAAGGTTCTTGCTTCTCTGCTTTCACCTACGGCATTTGCTCTGGGTTCTATCAACTTTGCTGATTATGAGCGTGCTCATGTTGGGCTTCGTTGGAGCAACATATGGCGGGAGTCCTCTGGAGTGAACTTCTCCGCATGTCTTCTGATGATGATACTTGATACACTGCTCTATTGTGCAATTGGCCTCTATTTCGATAAGGTTCTTCCAAGGGAGTATGGACTGCGATATCCATGGAACTTTATTTTCAAAAAGGACTTCTGGAGAAAGAAAAAAGTTGTAAATAATTGTTCCTCCGGTTTTAAAGTTAAAACTGCTGGTAAGTGTTCTGAGTCAGAAGGGAATCTTTTGGGGCAAGATACTTCCAATTCTGCTATAGAAGCAATAAGCTTAGACATGAAACAACAGGAGATTGATGGCAGGTGCATTCAAATTAGGAATTTGCATAAAGTGTATGCTACTAAAAAAGGAGATTGCTGTGCTGTTAACTCATTGCAGCTGACATTATATGAAAATCAGATTCTTGCTCTTCTAGGACATAATGGAGCTGGGAAAAGCACAACAATATCAATGCTTGTTGGTCTTCTTCCTCCTACTTCTGGGGATGCTTTAATATTTGGAAAGAACATTGTCTCCGATATTGATGAGATACGGAAGGTTTTGGGTGTCTGCCCACAACATGATATACTCTTTCCTGAATTGACGGTGAAAGAACATTTAGAACTATTTGCAATATTGAAGGGTGCAGAGGAAGACACATTGGAGACCGTTATTATTAATATGGCTGATGAGGTGGGCCTGGCTGATAAAATCAACACTGTCGTGAGATCTCTTTCTGGTGGCATGAAGAGGAAATTGTCTCTTGGAATTGCGTTGATTGGAAACAGTAAGGTTATAATTCTTGATGAGCCTACAAGTGGAATGGATCCATATTCGATGCGTTTGACTTGGCAGTTAATAAAAAAAATCAAGAAGGGCAGGATAATTTTGCTAACAACACATTCTATGGATGAAGCAGATGAACTAGGTGACCGGATAGCTATCATGGCCAATGGTTCTCTGAAATGCTGTGGAAGCTCCCTTTTCTTGAAGCATCATTATGGAGTCGGATACACGCTAACTCTCGTAAAGTCCGCTCCTACTGCTTCTATAGCTGGTGATATTGTATACCGATATATTCCGACAGCAACCTGTATAAGCGAGGTTGGAACTGAGATTTCCTTCAGGCTCCCTATGGCATCCTCCTCAACCTTTGAGAGGATGTTCAGGGAAATTGAAGGTTGCATGAAAAAGACAGTTTTGAGCATGGAAATAAGGGGCAGTTGTGAAAAAGACAGTTACGGTATCGAAAGTTATGGTATATCTGTAACAACCCTGGAGGAGGTATTCTTGAGAGTAGCTGGATGCGACTATGATGAAGTTGAATGTTTTGAAGAAAATAACCATTCCCTTATATCAGAATCTGTGGTTTCTCTTCCTTCTAATGATCGTCCATCAACAAAAATATGTTATTATAAAGTTTTTGGAAATTATAAGAAGATTATTGGCTTCATGTCTACCATGGTTGGGAGAGCCTGTGATTTAATTTTTGCTGCAGTTATTAGTTTCATCAACTTCATAGGCCTGCAGTGTTGTAGCTGTTGTCTCATTACTACGTCCACCTTTTGGCAACATTCTAAAGCTTTATTTATTAAGAGGGCGATATCTGCTCGGAGAGATCACAAAACAATTATGTTTCAGCTACTGATTCCCGCTATCTTCTTGTTTATTGGTCTTCTATTTATGGAGCTCAAGCCACATCCAGATCAGATTCCACTGACTCTTTCAACTTCTTATTTTAATCCTCTATTGAGTGGTGGGGGTGGGGGTGGTCCAATTCCGTTCAATCTATCTTTTCCAATTGCTGAAAAGGTAGCACAAAATGTCAAAGGAGGTTGGATTCAAAGGTGCAACCCAAGCTCATACAAATTTCCCAATTCAGAAAAAGCATTAGCTGATGCAGTGGAAGCAGCAGGGCCAACTTTGGGACCTTCTCTACTTTCAATGAGTGAATATTTGATGTCTAGCTTTAATGAATCCTACCAATCGAGGTATGGGGCAATTGTGATGGATGATCAGAACACGGATGGAAGCTTAGGCTACACTGTATTACACAACTTTTCTTGTCAACATGCTGCTCCCACCTTTATCAATCTGATGAATTCTGCAATTCTTAGGCTTGCTAGTCATAACATGAATGCAACAATTCAGACACGCAACCATCCTCTGCCAATGACTCAAAGCCAGCACTTACAACGTCATGATCTGGATGCCTTCTCTGCTGCTATCATTGTCAATATAGCATTCTCTTTCATTCCTGCCTCATTTGCTGTTTCAATTGTTAAGGAACGCGAAGTGAAAGCTAAGCACCAACAACTAATCAGCGGGGTTTCAGTCCTTTCATATTGGGCCTCTACATTTATTTGGGACTTTGTCAGCTTCTTGTTTCCGGCCTCTTTCGCCATAGTTCTTTTTTACATCTTTGGTTTGGATCAGTTTGTTGGAGGAGTTTCTTTGTTACCCACGATCATTATGCTTTTGGAATATGGACTTGCAATTGCATCGTCAACTTATTGCCTTACATTTTTCTTTTTTGACCATACCGTGGCTCAGAATGTGGTTCTTCTGGTGCACTTTTTTTCTGGATTGATACTGATGGTTATCTCATTCATTATGGGACTCATCCCATCCACAATAAGTGCCAATTCTTTTCTTAAGAACTTTTTCAGAATATCTCCTGGATTTTGTTTTGCTGATGGACTTGCTTCATTAGCTCTTCTGCGGCAAGGAATGAAAGATAAAACAAGTGATGGAGTATATGACTGGAATGTTACGGGTGCCTCCATTTGTTATCTTGCTGTTGAGAGCGTTATTTATTTTTTATTGACACTCGGGCTTGAAATTTTTCCTTCACTCAAGTTAACTCCATTCATGGTGAAGAAGTGGTGGCGTAAAATTAATATTTTCCCACGCAATACTACTTATCTGGAACCTTTATTAGAACCTTCTCCAGAAACTATATTTATGGATCTCAACGAAGACGTGGATGTGAAAACAGAAAGAAGTAGAGTACTCTCTGGTTCCATTGACAATGCCATTATCTACTTGCGCAATCTTCGCAAGGTGTATTATGAAGAGAAGAAACACGGGAAAAAGGTTGCAGTAGATTCATTAACCTTCTCAGTTCAGGAAGGAGAATGTTTTGGCTTTTTAGGAACAAATGGAGCTGGAAAGACCACAACACTTTCTATGCTATGCGGGGAAGAATCTCCTTCTGATGGGACAGCTTTTATTTTTGGCAAAGATATCTGTTCCCATCCCAAGGCTGCTCGTAAATATATTGGATATTGTCCACAATTTGATGCTCTGTTGGACTTCTTAACTGTCAAAGAACATCTTGAGCTCTATGCTAGAATAAAAAGTGTTCCAGACTACACAATAGACAATGTTGTTATGGAAAAGCTGGTGGAGTTTGACTTATTGAAGCATGCTAATAAACCATCATTTTCACTTAGTGGAGGGAATAAAAGAAAACTATCCGTTGCAATTGCAATGATTGGAGATCCTCCTATTGTCATTCTTGATGAACCATCAACAGGAATGGATCCCATTGCCAAAAGATTCATGTGGGATGTAATATCTAGAATCTCAACTAGACGAGGAAAGACTGCAGTCATTCTTACCACCCATAGCATGAATGAAGCTCAAGCCTTGTGTACCAGAATAGGCATTATGGTTGGTGGGCAACTAAGATGCATTGGAAGTCCGCAGCATCTAAAAACAAGATTTGGCAATCATCTAGAACTAGAGGTAAAACCTACTGAAGTGAGCTCTGTGGACTTGCAAACACTCTGCCAAGCTATTCAGGAAATGCTTTTTGATGTCCCTTCTCAACCTAGAAGCTTACTTAATGACCTTGAAATTTGCATTGGAGGTGCTGACTCTGGCACCTCAGGAAATACCTCCATTGCAGAGATTAGCTTGACATCCGAGATGATAGGCTTAATTGGACACTGGCTTGGCAACGAAGAAAGAGTGAATACTCTAATGCGCTGCACACCTGTCTGTGAAGGGGCCTCTCAGGAACAGTTATCCGAACAATTATTTCGAGATGGTGGTATTCCATTGCCCGTGTTTTCTGAGTGGTGGTTGTCTAAACAAAAATTCTCAGAAATTGACTCATTTATTCTATCTTCATTTCGTGGAGCAAGATGCCAGGGATACAATGGTTTAAGCATCAGATACCAGTTACCTTGTGATGAGGACTTTTCCCTGGCAGATGTTTTTGGACTTCTTGAAGCAAACAGAGATAGATTAGGAATTGCAGAGTACAGCCTCAGCCAATCAACTCTAGAGACCATATTTAATCATTTTGCAGCTAATTCATGA 5679 0.3999 MGTASRQLKVMLRKNWLLKKRHPFITAAEILLPAIVLLLLAAVRTRVDTQIHPAQSHIQKDMFVEVGKGISPNFQQVLESLLDKREYLAFAPDTNETRRMIDVVSINFPILKLVSIVYKDELELETYIRSDAYGTCSDVRNCSNPKIKGAIVFYEQGPQLFDYSIRLNHTWAFSGFPDVTTIMDTNGPFLNDLELGVSSVPTMQYSFSGFLTLQQMVDSFIILTTQQPELQSNAKTVKLPLLELSDTDFSLKVPWTQFIPTNIRIAPFPTREYTDDQFQAIVKEVMGILYLLGFLYPVSRLISYSVFEKEQKIKEGLYMMGLKDGIFHLSWFITYALQFAISSAVITACTMDNIFKYSDKTLVFAYFFIFGLSAIMLSFFISTFFKRAKTAVAVGTMSFLGAFLPYYTVNDEGVSMILKVLASLLSPTAFALGSINFADYERAHVGLRWSNIWRESSGVNFSACLLMMILDTLLYCAIGLYFDKVLPREYGLRYPWNFIFKKDFWRKKKVVNNCSSGFKVKTAGKCSESEGNLLGQDTSNSAIEAISLDMKQQEIDGRCIQIRNLHKVYATKKGDCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLLPPTSGDALIFGKNIVSDIDEIRKVLGVCPQHDILFPELTVKEHLELFAILKGAEEDTLETVIINMADEVGLADKINTVVRSLSGGMKRKLSLGIALIGNSKVIILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEADELGDRIAIMANGSLKCCGSSLFLKHHYGVGYTLTLVKSAPTASIAGDIVYRYIPTATCISEVGTEISFRLPMASSSTFERMFREIEGCMKKTVLSMEIRGSCEKDSYGIESYGISVTTLEEVFLRVAGCDYDEVECFEENNHSLISESVVSLPSNDRPSTKICYYKVFGNYKKIIGFMSTMVGRACDLIFAAVISFINFIGLQCCSCCLITTSTFWQHSKALFIKRAISARRDHKTIMFQLLIPAIFLFIGLLFMELKPHPDQIPLTLSTSYFNPLLSGGGGGGPIPFNLSFPIAEKVAQNVKGGWIQRCNPSSYKFPNSEKALADAVEAAGPTLGPSLLSMSEYLMSSFNESYQSRYGAIVMDDQNTDGSLGYTVLHNFSCQHAAPTFINLMNSAILRLASHNMNATIQTRNHPLPMTQSQHLQRHDLDAFSAAIIVNIAFSFIPASFAVSIVKEREVKAKHQQLISGVSVLSYWASTFIWDFVSFLFPASFAIVLFYIFGLDQFVGGVSLLPTIIMLLEYGLAIASSTYCLTFFFFDHTVAQNVVLLVHFFSGLILMVISFIMGLIPSTISANSFLKNFFRISPGFCFADGLASLALLRQGMKDKTSDGVYDWNVTGASICYLAVESVIYFLLTLGLEIFPSLKLTPFMVKKWWRKINIFPRNTTYLEPLLEPSPETIFMDLNEDVDVKTERSRVLSGSIDNAIIYLRNLRKVYYEEKKHGKKVAVDSLTFSVQEGECFGFLGTNGAGKTTTLSMLCGEESPSDGTAFIFGKDICSHPKAARKYIGYCPQFDALLDFLTVKEHLELYARIKSVPDYTIDNVVMEKLVEFDLLKHANKPSFSLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWDVISRISTRRGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNHLELEVKPTEVSSVDLQTLCQAIQEMLFDVPSQPRSLLNDLEICIGGADSGTSGNTSIAEISLTSEMIGLIGHWLGNEERVNTLMRCTPVCEGASQEQLSEQLFRDGGIPLPVFSEWWLSKQKFSEIDSFILSSFRGARCQGYNGLSIRYQLPCDEDFSLADVFGLLEANRDRLGIAEYSLSQSTLETIFNHFAANS 1892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03273 1892 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 557 798 IPR027417 -
Trre14g03273 1892 CDD ABC_subfamily_A 1464 1690 - -
Trre14g03273 1892 Pfam ABC transporter 1486 1628 IPR003439 GO:0005524
Trre14g03273 1892 Pfam ABC-2 family transporter protein 231 481 IPR013525 GO:0016020|GO:0140359
Trre14g03273 1892 Pfam ABC-2 family transporter protein 992 1394 IPR013525 GO:0016020|GO:0140359
Trre14g03273 1892 FunFam ATP-binding cassette sub-family A member 12 552 797 - -
Trre14g03273 1892 CDD ABC_subfamily_A 560 781 - -
Trre14g03273 1892 ProSitePatterns ABC transporters family signature. 1601 1615 IPR017871 GO:0005524|GO:0016887
Trre14g03273 1892 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 560 793 IPR003439 GO:0005524
Trre14g03273 1892 ProSitePatterns ABC transporters family signature. 695 709 IPR017871 GO:0005524|GO:0016887
Trre14g03273 1892 SMART AAA_5 588 770 IPR003593 GO:0016887
Trre14g03273 1892 SMART AAA_5 1494 1680 IPR003593 GO:0016887
Trre14g03273 1892 Pfam ABC transporter 580 723 IPR003439 GO:0005524
Trre14g03273 1892 FunFam ABC transporter A family member 1 1453 1707 - -
Trre14g03273 1892 Gene3D - 1456 1706 IPR027417 -
Trre14g03273 1892 Gene3D - 547 796 IPR027417 -
Trre14g03273 1892 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1459 1696 IPR027417 -
Trre14g03273 1892 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1464 1702 IPR003439 GO:0005524
Trre14g03273 1892 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 989 1399 IPR026082 GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03273 Trre-Chr14 40998121 41027770 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03273 560 796 Calmodulin-binding Proteins AT2G36910 25.911 2.48e-17 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03273 K05643 - gmx:100803263 3326.57