Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03212 ATGCATGACTTGATACAAAAAATGGGAAAACAAATTGTTCTCAAAGAATGTCCTAAAAATGCCGGACAACGAAGTAGATTATGTGATCCAAAGGAAGTTTGTGACGTATTTAAAAATAATAGAGTAAGAGAGAGTGTTGAAGTCATAATTATAGATGCTAATGAAAATACAAATATCAATTTAAGCCCCAAAGCATTTGAAAAGATGGTAAACCTAAGGTTACTTGCTTTTCGAGACCACGAGGGAATCAAATCGGTAAGCCTTCCTCGTGGTCTTGACTTATTGCCAGAAAATTTGAGATATTTTCTGTGGGATGGATATCCATTAAAGTCTTTGCCTCCAACCTTTTCTCCTGAAATGCTTGTAGAGCTTTCCCTGCAAGATAGCCGTGTAGAAAAACTTTGGAATGGAGAAATGAATTTGCCAAATTTAGAGAGACTCGACCTCGCTGGCTCCAAAAAGTTGATAGTGTCCAAATGTGTCTGGTTCCCCAAATCTAAAATATTTAAGACTTGA 516 0.3663 MHDLIQKMGKQIVLKECPKNAGQRSRLCDPKEVCDVFKNNRVRESVEVIIIDANENTNINLSPKAFEKMVNLRLLAFRDHEGIKSVSLPRGLDLLPENLRYFLWDGYPLKSLPPTFSPEMLVELSLQDSRVEKLWNGEMNLPNLERLDLAGSKKLIVSKCVWFPKSKIFKT 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03212 171 Gene3D Ribonuclease Inhibitor 25 168 IPR032675 -
Trre14g03212 171 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 155 IPR044974 GO:0006952
Trre14g03212 171 SUPERFAMILY L domain-like 49 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03212 Trre-Chr14 40334190 40334923 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03212 1 138 WRKY Transcription Factor Family AT4G12020 42.143 1.67e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03212 - - mtr:25501083 229.565