Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03186 ATGGCGATGAATATGAATGCTAATATGATTGCGTTCGATCAAGACATTCTCACGAGATCGATCGATCTAGAACGACATTGCTTTGGAGAATTTTCGATGGCTAATGTTCAAGCCAATACAGTTATGGAAGATCAAAGTAATGTCGAAGTTGCTGCTCGCAATACACTCTTTCTTGGAGTTTATGACGGCCATGGTGGCGCCGATGCATCGCTATATGTTCTTAATAACCTCTTCGGAAATTTATTGAGGTTTGCTCATGCGAATGATAATTCCGCTATTACTGCGGAAAATTTGAGGAATGCGGTTTTGGATACTGAACGTGGATTTTTGGAATATGTGGAAGCGAATATTGATCGAATGCAGCAGATCGGAAAAATTGGTTCATGCTGTCTTGCTGGTGCAGTTTGGAAGGATAAGCTATATGTTGCGAATCTTGGAGATTCGCGTGCTGTGATTGGTTCTGTGATTAACAGAACACTCCAAACTACACAATTGACGACAGATCACAATTGTAATAATCAGGTTATTCGACAAGAACTCCACGCATTGCATCCCGATGATCCTACCATTGTGATGGAGAGGAACGGAGCGTGGCGCGTCAAAGGCATCATTATGGTGAGTAGAAGTATTGGTGATGCATATTTGAAGAGGCCTGATTTTTCGTTGCTCGATACATTCCCCCAATATGAACCACCTGTTCCTCCACCTTTTACTAGAGGGGTGTTATCTGCTGAACCAGAGATTGTTACTAGAGATATAGCAGATACTGATAAGTTTGTTATATTTGCTTCTGATGGACTTTGGGAGCACGTGTCTAATGAAGAAGCTTGTGAAATTGTTCATAGGAATCCAAGACATGGAATTGCGAAGAGGATTCTGAGTCATGCTCTAGAACGAGCTGCTAGAAGATATGATATTAGCTATAGGGAGATGCAGACTTTTCCTACGGGACGTGAAAATCTGGGCAGGAGAACTTTTCATGATGATATTAGTGTCATTGTTGTCTTCCTTGGCAAGAAAACAATTTTCAGGAAGTCAGTGGAAAATATGTCCTATAGAGGCTCACATGCCCAGGGTCTACCTTCTGATTTTACAGGTTCTAGATTACTTGATTCGAAATTTAAGGGTCTGAAGGATAGGATAAAAAAACAGTTCAAGGGATCAAGTTCGAAGGGTAATAGCTCTAGGACTGCTGAGCATGAGATCGTTAGTTTTATTGACCGTGTGAAACTTCTTGATATGGGTATGGGTGACACATCTAAGAATCGGACTGATCGTGATGAAGTGGCTGAGAATAAAGGTGACCAGAGTTCTCGGCCAAAGAGCCGTTGGAACAAGCTGAAAAAGAAGTTTACACCAAAGAAGCACTAA 1371 0.415 MAMNMNANMIAFDQDILTRSIDLERHCFGEFSMANVQANTVMEDQSNVEVAARNTLFLGVYDGHGGADASLYVLNNLFGNLLRFAHANDNSAITAENLRNAVLDTERGFLEYVEANIDRMQQIGKIGSCCLAGAVWKDKLYVANLGDSRAVIGSVINRTLQTTQLTTDHNCNNQVIRQELHALHPDDPTIVMERNGAWRVKGIIMVSRSIGDAYLKRPDFSLLDTFPQYEPPVPPPFTRGVLSAEPEIVTRDIADTDKFVIFASDGLWEHVSNEEACEIVHRNPRHGIAKRILSHALERAARRYDISYREMQTFPTGRENLGRRTFHDDISVIVVFLGKKTIFRKSVENMSYRGSHAQGLPSDFTGSRLLDSKFKGLKDRIKKQFKGSSSKGNSSRTAEHEIVSFIDRVKLLDMGMGDTSKNRTDRDEVAENKGDQSSRPKSRWNKLKKKFTPKKH 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03186 456 SMART PP2C_4 15 335 IPR001932 -
Trre14g03186 456 MobiDBLite consensus disorder prediction 416 456 - -
Trre14g03186 456 ProSiteProfiles PPM-type phosphatase domain profile. 30 337 IPR001932 -
Trre14g03186 456 ProSitePatterns PPM-type phosphatase domain signature. 57 65 IPR000222 GO:0043169
Trre14g03186 456 SUPERFAMILY PP2C-like 26 338 IPR036457 -
Trre14g03186 456 CDD PP2Cc 28 337 IPR001932 -
Trre14g03186 456 Gene3D - 11 347 IPR036457 -
Trre14g03186 456 PANTHER PROTEIN PHOSPHATASE 28 335 IPR015655 GO:0004722|GO:0006470
Trre14g03186 456 MobiDBLite consensus disorder prediction 419 442 - -
Trre14g03186 456 Pfam Protein phosphatase 2C 51 301 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03186 Trre-Chr14 39803459 39805750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03186 17 365 PP2C-type Phosphatase Gene Family AT5G06750 47.619 4.52e-105 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03186 K01102 - rvl:131322871 326.635