Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03181 ATGATCAATCAAAAAGCTGAGATTGAATCTCAGGATATGATTGAAGCAGAGGAATCTGTTTCTAGTCATCAAGAAAACAGAGGAAAATTTGAATCTAAGAAGAAAATGAAGAAAGTGAGGTCAATGAAGCTTCAAAGATTGTCAAGCAGAGGAAGGAAATCACAAAATGATCACAAATTTTCCATCCTTTCATCTGTTGGAACAGTTGAAATGGCAGATGCATCACCTAATTACATGAAGGGCACTAGTAGTAGTAGTTCACATGCAAAGGATAGTTTTCAGATTGAAGAAAGAGTTACCACAGACAAGAGTTTAACAAGAGTGACTACTTCCAAAGTGAAGAGAAGTTTGATTAGAAAGTTATCTGGAAGGACTGAACAAAACAGGAAACTGAAATCATCAAGATCAATCAAGGTTGCATCTGTCAAGGGACCTAAATCAACAACAATGCTATATTCTGAATCTGAATCCATTCATGGCAGTGATGGCAAGAATAGGAATAATACAAGTGATGCTGGTAACAAGTCTCAGAGAATCATTACTAGAAGATTAAGCTTGAAGCCTGTGAGGATCTCTTCAAAAAAACCAAGTTTGCATAAAGCCACATGTTCTTCCACTATCAAGGATTCACATTTTTCTGATCAGATTGACCTTCCACAAGAGGGAAGTAGTTCTCAAGGCGTATCAGCTGTTAGGGTTTGTCCATATACTTACTGCTCTCTTCATGGTCATCAACACGGCGATGTGCCTCCGTTGAAGCGCTTTGTGTCGATGAGGAGACGTCAGTTGAAGACACAAAAGAGCGTGAAAAAGGACGCCAGATCAAAGCAAATTGGTAATGCAAGGAAAGCCACTCAGAAAATCAAAACTGTTCAAAGTGAAGATGGAAACTCTCACTTTCAGAATGCAAAAAATCAGGCAACGGAATCATCGCCTTTTAAGTCTCGTGATACTCCACCATCCACAGTTAATGAAGGTGATACTTCAACCAAAGGCAAAATTATGGAGCCAGATTTTGAATTGTTGCAGAAGAGTTTTGCACAAGAAGAGCCTAAACCTGGTAGTACTACTAGTGTGTCATTTGGAGTGCAGGAAAGAGATCAGAAATATATAAAAAAGTGGCATTTGATGTATAAGCATGCAGTATTAAGTAACACGGGGAAATGTGAAAATAAGGTTCCCTTTGTTGAGAAGGACATAAAAGGTAGAGAGGAAGAAGATGCTCTCGCGTTTAATGGAGAAAACAACTCTTCTTGTCACAATTGTAGTGAAACAGATTCTGATATGGATGATGAAAAGAAGAATGTAATTGAGCTGGTGCAGAAAGCATTTGATGAAATTCTTCTCCCTGAAGCTGAAGACCTTTCCTCTGATGATCATTCAAAATCAAGAGGCAATGAAACAAACGAGGTACTCTTAGAAAAGAGTGAAGGTAAGATTGAAGAAAGGAATGCCACAACTTTCGCAGAATCTCCTAAAGAAGTGCAGAAGATGGAGAGCAAACCAAAAAGCTGGAGCCGTCTAAAAAGGGTAATCCTCCTGAAAAGGTTTGTAAAGGCATTAGAGAAGGTAAGAAACATCAACCCTAGAAGACCAAGACAGCTGCCTTCAGATGCCAACTTCGAAGCGGAAAAAGTTTTGCTTAGTCGACAAACAGCGGAAGAGAGGAAAAAATCGGAGGAGTGGATGCTTGACTATGCACTTCAAAAGGTTATTTCTAAACTTGCACCTTCTCAAAGGCAAAAAGTGACGCTTTTAATAGATGCTTTTGAAAGAATTCGACCATTTCAAGATGCTGAAAATGGATCTCGATCTACTGCGATGGTGGAATCTCAAGAAAATCCGATTCAATCACTCGATGCTTCCTCAAATCATAGCAAGGAAGAAATATACGACGAAAGTGATTGTGAGGTAACTGAGAGTGCAAGGAATGACAAGAACATGACTGCATGTAATGAAAATGATGAAAGTGCAAGTACTGTGGAATCAACATTAGCAGATGTAGTCAAGTCCCCTGTTTTCAATGTCTTGGAGGAGGAAGTAACAACCAAAGGCGAAAATATGGAGCCAGATCATACAGTGCCGCAGAAGATTTTTGTGCAGGAAGAGCCTAAACATGGTAGTAGTAGCAGTAGTACTAATGATGTGCCACATGGAGTGCAGGAAGGAGATCAGAAATATATAAGAAAGTGGCATTTGATGTTTAAGCATGCAGTATTAAGTAACACGGGAAAATGCGAAAATGACAAAGAAGGTAGAGGGGAAGATGATATCACATTCAATGGAGGAAAAAGCTCTTGTCACAATTATTGTGAAACAGATTCGGATATGGATGATGAAAAGAAGAATGTAATTGAGCTTGTGCAAAAAGCATTTGATGAAATTCTTCTCCCTGAAGTTGAAGACCTCTCTTCTGATGACCATTCAAATTCTAGAAGCTATGGTTCAGAAGAAGTACTCGTAGAAAAGAGTGAAGGTAAAGAAGAAGAAATGAATACCACAACTTTCACAGCATCTCCAAAAGAATCACAGAAGATGGAGAACAAACCGAAAAGCAGGAGTCATCTGAAAAAGGTAATCCTCTTGAAAAGGTTTGTAAAGGCATTAGATAAGGTAAGAAACATCAATCCAAGGAGACCGAGACAATTGCCTTCAGATGCCAACTTCGAAGCAGAAAAAGTTTTTCTTAACCGCCAAACATCAGAAGAGAGGAAAAAATCGGAGGAGTGGATGCTTGACTATGCACTTCAAAAGGTTATTTCTAAACTAGCACCTGCTCAAAGACAAAAGGTGACACTTCTCATAGAAGCTTTTGAAACAATTCGGCCATTTCAAGATGCTGAAAATGGACCTCAGTCTACTGTGACAGTGGAATCTCATGAAAATCCGATTCAGTCATTTGATGCTTCCTCAAATCATAGCAAGGAAGAAAGAATGGACGGAAGAGATTTTGAGGTAACTGAGAGAGCAAGGAATGACAAGAATACGACTGCATGTAATGAAAATGAGGAAAGTGCTGCTGTCGAAACAACATCAACAGATGTAGTCCAGTTTCCTGTTTTCAATGTGGGGATATTGGAGGAGGAAGTAACAACCAAAGGCGAAAATATGGAGCCAGATCATATAGTGCCGCAGAAGATTTCCGTACAGGAAGAGCCTAAACATGGTAGTAGTACTACTGGTGTGCCATATGGAATGCAGGAAGGAGATCAGAAATATATAAAAAAGTGGCATTTGATGTATAAGCATGCAGTATTAAGTAACACAGGAAAATGCGAAAATGAGCCTCCGTTTAGTGGGAAGGACAACAAAGGTAGAGAGGAAGATGATGTCACCTTCAATGGAGGGAAAAGCTCTTGTCACAATTATAGTGAAACAGATTCAGATATGGATGATGAAAAGAAGAATGTAATTGAGCTTGTGCAAAAAGCATTTGATGAAATTCTTTTACCTGAAGCTGAAGACCTCTCTTCTTATGATCATTCAAAATCTAGAAGCTATGGCTCAGAAGATGTACTCTTAGAAAAGTGTGAAGGTAAAGAAGAAGAAAGGAATACCACAACTTTCACAGAATCTCCTAAAGAATCATTGAAGATGGAGAACAAACTGAAAAGCTGGAGCTATCTGAAAAAGGTAATCCTCTTGAAAAGGTTTGTAAAGGCATTAGATAAGGTAAGAGACATCAATCCAAGAAGACCAAGACAATTGCCTTCAGATCCCAACTTTGAAGCGGAGAAAGTTTTTCTTAACCGCCAAACAGCGGAAGAGAGGAAAAAATCGGAAGAGTGGATGCTTGACTATGCACTTCAAAAGGTTATTTCTAAACTTGCACCTGCTCAAAGACAAAGAGTGAGACTTCTAATAGAAGCTTTTGAAACAATTCGGCCGTTTCAAGATGCTGAAAAAGGACCGCGGTCTTCTGTGACGGTGGAATCCCAGGAAAATCCAGTTCAATCGCTTGATGCTGCTTCAAATCATAGAAAGGAAGAAATAACTGACGAAAGAGATTCTGTTTACTTGGCTAAGTCATTGCTTGGAAAAGTATCTTGTTCTAATGATAGTACTATGAAATTTTCAGATAAATCTAGTGACAATCCAATGCATGAACTTTGCAATCCTATTAAGCCAGTGGAAACTGTAAGCAGTTGTCATGAGGAAGTTCCAGAAGATTTGGTATCAGATTTGAATGCAGAAAATCCAAGTATCAAATCTGATAATAGTGAACAATTTTCTTTGACAAGAAGCTTAATCCTAAATGGTCTTGTCAGATCACTTAAAGCTAATTTGGTTGTTCCAGAAGCACCGTCAAATCAACTAGAAGAATCGACAAAAGGCAGACAAGATATGATTGAAAAAGATCAATTGGAAACATCCGAAGCTTCTACTAGTGCTGTTGTAGAATCTGAGACTCAGGCAGAGAAACAAGGCAACACAGGGTTGTGGTTCATGGTGTATAAGCACATGGTATCAGATATGACTGAAAACAATTCCAAGTCATTAACTGATGTAGCAGATGAGAGAGAGTCAAAGTATGAAGGCAGCATAACAAGAGAAAATTCTGTCTCTGATGAAAGTACACCTGTGACTAATCAACAAGATATGCACATCAAGGATCGTGTTCTAGAGGATCGCGAAGTTGAACTTCGACAGAACGAAGCAATCAAGATGGTAGAAGAAGCAATTGATTCAATCCTTCCAGACAGACAGCCACTTACCGACAACAACACAATTGACAGAACTGAAAGAATGTACAGTGGAGGCTTGAACCAAAAAGAAGAAAAGATGGAATCTGGAAATGGAATAGCGGTGGAACAAAAAGAAGAATCGGTATCGAAGGAGGGAAACAAACCAAGCCAGAAATTGTCTAGAAATTGGAGCAATCTTAGAAAAGTGGTACTGCTTAAGAGATTCATCAAGGCATTGGAGAAAGTAAGGAAATTCAACCCAAGAGGGCCTAGATATCTACCATTAGAAGCTGATTCAGAAGATGAAAAAGTTCAACTGAGGCATCAAGATATGGCAGAGAGAAAAGGCACAGAAGAATGGATGCTTGATTATGCACTTAGACAGGTTGTTTCCAAATTAACTCCAGCTAGGAAGAGAAAGGTGGAGCTTTTAGTGGAAGCGTTCGAGACCGTAAAAAAGTGA 5148 0.3904 MINQKAEIESQDMIEAEESVSSHQENRGKFESKKKMKKVRSMKLQRLSSRGRKSQNDHKFSILSSVGTVEMADASPNYMKGTSSSSSHAKDSFQIEERVTTDKSLTRVTTSKVKRSLIRKLSGRTEQNRKLKSSRSIKVASVKGPKSTTMLYSESESIHGSDGKNRNNTSDAGNKSQRIITRRLSLKPVRISSKKPSLHKATCSSTIKDSHFSDQIDLPQEGSSSQGVSAVRVCPYTYCSLHGHQHGDVPPLKRFVSMRRRQLKTQKSVKKDARSKQIGNARKATQKIKTVQSEDGNSHFQNAKNQATESSPFKSRDTPPSTVNEGDTSTKGKIMEPDFELLQKSFAQEEPKPGSTTSVSFGVQERDQKYIKKWHLMYKHAVLSNTGKCENKVPFVEKDIKGREEEDALAFNGENNSSCHNCSETDSDMDDEKKNVIELVQKAFDEILLPEAEDLSSDDHSKSRGNETNEVLLEKSEGKIEERNATTFAESPKEVQKMESKPKSWSRLKRVILLKRFVKALEKVRNINPRRPRQLPSDANFEAEKVLLSRQTAEERKKSEEWMLDYALQKVISKLAPSQRQKVTLLIDAFERIRPFQDAENGSRSTAMVESQENPIQSLDASSNHSKEEIYDESDCEVTESARNDKNMTACNENDESASTVESTLADVVKSPVFNVLEEEVTTKGENMEPDHTVPQKIFVQEEPKHGSSSSSTNDVPHGVQEGDQKYIRKWHLMFKHAVLSNTGKCENDKEGRGEDDITFNGGKSSCHNYCETDSDMDDEKKNVIELVQKAFDEILLPEVEDLSSDDHSNSRSYGSEEVLVEKSEGKEEEMNTTTFTASPKESQKMENKPKSRSHLKKVILLKRFVKALDKVRNINPRRPRQLPSDANFEAEKVFLNRQTSEERKKSEEWMLDYALQKVISKLAPAQRQKVTLLIEAFETIRPFQDAENGPQSTVTVESHENPIQSFDASSNHSKEERMDGRDFEVTERARNDKNTTACNENEESAAVETTSTDVVQFPVFNVGILEEEVTTKGENMEPDHIVPQKISVQEEPKHGSSTTGVPYGMQEGDQKYIKKWHLMYKHAVLSNTGKCENEPPFSGKDNKGREEDDVTFNGGKSSCHNYSETDSDMDDEKKNVIELVQKAFDEILLPEAEDLSSYDHSKSRSYGSEDVLLEKCEGKEEERNTTTFTESPKESLKMENKLKSWSYLKKVILLKRFVKALDKVRDINPRRPRQLPSDPNFEAEKVFLNRQTAEERKKSEEWMLDYALQKVISKLAPAQRQRVRLLIEAFETIRPFQDAEKGPRSSVTVESQENPVQSLDAASNHRKEEITDERDSVYLAKSLLGKVSCSNDSTMKFSDKSSDNPMHELCNPIKPVETVSSCHEEVPEDLVSDLNAENPSIKSDNSEQFSLTRSLILNGLVRSLKANLVVPEAPSNQLEESTKGRQDMIEKDQLETSEASTSAVVESETQAEKQGNTGLWFMVYKHMVSDMTENNSKSLTDVADERESKYEGSITRENSVSDESTPVTNQQDMHIKDRVLEDREVELRQNEAIKMVEEAIDSILPDRQPLTDNNTIDRTERMYSGGLNQKEEKMESGNGIAVEQKEESVSKEGNKPSQKLSRNWSNLRKVVLLKRFIKALEKVRKFNPRGPRYLPLEADSEDEKVQLRHQDMAERKGTEEWMLDYALRQVVSKLTPARKRKVELLVEAFETVKK 1715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03181 1715 MobiDBLite consensus disorder prediction 263 334 - -
Trre14g03181 1715 MobiDBLite consensus disorder prediction 10 32 - -
Trre14g03181 1715 MobiDBLite consensus disorder prediction 33 47 - -
Trre14g03181 1715 SMART CaM_binding_2 1602 1715 IPR012417 GO:0005516
Trre14g03181 1715 SMART CaM_binding_2 1180 1296 IPR012417 GO:0005516
Trre14g03181 1715 SMART CaM_binding_2 827 943 IPR012417 GO:0005516
Trre14g03181 1715 SMART CaM_binding_2 479 595 IPR012417 GO:0005516
Trre14g03181 1715 MobiDBLite consensus disorder prediction 140 178 - -
Trre14g03181 1715 MobiDBLite consensus disorder prediction 74 90 - -
Trre14g03181 1715 MobiDBLite consensus disorder prediction 600 624 - -
Trre14g03181 1715 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 959 1296 IPR044681 GO:0005516
Trre14g03181 1715 MobiDBLite consensus disorder prediction 1301 1333 - -
Trre14g03181 1715 MobiDBLite consensus disorder prediction 1496 1531 - -
Trre14g03181 1715 MobiDBLite consensus disorder prediction 279 329 - -
Trre14g03181 1715 MobiDBLite consensus disorder prediction 600 630 - -
Trre14g03181 1715 MobiDBLite consensus disorder prediction 451 471 - -
Trre14g03181 1715 MobiDBLite consensus disorder prediction 801 830 - -
Trre14g03181 1715 MobiDBLite consensus disorder prediction 74 98 - -
Trre14g03181 1715 MobiDBLite consensus disorder prediction 1305 1322 - -
Trre14g03181 1715 MobiDBLite consensus disorder prediction 1453 1472 - -
Trre14g03181 1715 MobiDBLite consensus disorder prediction 1089 1131 - -
Trre14g03181 1715 MobiDBLite consensus disorder prediction 1 61 - -
Trre14g03181 1715 MobiDBLite consensus disorder prediction 1097 1114 - -
Trre14g03181 1715 MobiDBLite consensus disorder prediction 1591 1621 - -
Trre14g03181 1715 MobiDBLite consensus disorder prediction 988 1011 - -
Trre14g03181 1715 MobiDBLite consensus disorder prediction 1597 1614 - -
Trre14g03181 1715 MobiDBLite consensus disorder prediction 1515 1531 - -
Trre14g03181 1715 MobiDBLite consensus disorder prediction 801 853 - -
Trre14g03181 1715 MobiDBLite consensus disorder prediction 124 178 - -
Trre14g03181 1715 MobiDBLite consensus disorder prediction 1500 1514 - -
Trre14g03181 1715 MobiDBLite consensus disorder prediction 1456 1472 - -
Trre14g03181 1715 Pfam Plant calmodulin-binding domain 841 941 IPR012417 GO:0005516
Trre14g03181 1715 Pfam Plant calmodulin-binding domain 1612 1713 IPR012417 GO:0005516
Trre14g03181 1715 Pfam Plant calmodulin-binding domain 1195 1294 IPR012417 GO:0005516
Trre14g03181 1715 Pfam Plant calmodulin-binding domain 493 593 IPR012417 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03181 Trre-Chr14 39768913 39775050 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03181 854 941 Calmodulin-binding Proteins AT5G04020 55.682 7.31e-23 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03181 - - tpra:123892280 2774.19