Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03167 ATGGGGTTGGCTGCAGAGTCACAGTTTCATGTTTTGGCTGTTGATGATAGCATCATAGATAGGAAACTTATTGAAAGGCTTCTCAAAACCTCTTCATATCAAGTTACTACAGTTGATTCTGGTAGCAAGGCTTTAGAGTTTTTGGGTCTATGTGAGAATGATGAGACCAACACAAATACACCATCTGTCTTTCCTAACAATCATCAGGAAGTGGAAGTGAATCTTGTTATAACAGATTACTGTATGCCTGGCATGACAGGCTATGATTTGCTTAAGAAAATCAAGGAATCATCATCATTGAAAAACATACCAGTTGTTATTATGTCATCTGAGAATGTACCTTCAAGGATCAATAGATGTTTAGAGGAAGGAGCAGAAGAATTTTTCTTGAAACCTGTAAGGCTATCAGATTTGAGTAGACTTAAACCTCACATGAAGAAAACCAAATTGAAAGATCAAAATCAAGAAACAGAACAAAAATTTGAAAACTCAGAAATTCTTCAAAATGAGCAAAAACAAGCACCAAAAGTTCAATTTCAACATTCAGAGACAGAATCACAATCACAGACACAGTTACAAGCACAATCAAATATTGATCAACAGCAACAATCACTACAACAAGGGAACAATAACAAGAGAAAGAATATGGAACAACAAGGTCTTTCATCTGAGACTGATAGAACAAGACCAAGATACAGTGGCATAGCTACTGTTGTATGA 720 0.3569 MGLAAESQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLCENDETNTNTPSVFPNNHQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLKNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVRLSDLSRLKPHMKKTKLKDQNQETEQKFENSEILQNEQKQAPKVQFQHSETESQSQTQLQAQSNIDQQQQSLQQGNNNKRKNMEQQGLSSETDRTRPRYSGIATVV 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03167 239 CDD REC_typeA_ARR 11 141 - -
Trre14g03167 239 SUPERFAMILY CheY-like 8 153 IPR011006 -
Trre14g03167 239 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 221 IPR045279 GO:0009736
Trre14g03167 239 Gene3D - 10 230 - -
Trre14g03167 239 MobiDBLite consensus disorder prediction 170 239 - -
Trre14g03167 239 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Trre14g03167 239 MobiDBLite consensus disorder prediction 170 230 - -
Trre14g03167 239 Coils Coil 147 170 - -
Trre14g03167 239 SMART REC_2 9 142 IPR001789 GO:0000160
Trre14g03167 239 Pfam Response regulator receiver domain 11 138 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03167 Trre-Chr14 39428451 39430394 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03167 1 239 Response Regulator Gene Family AT3G57040 61.694 2.76e-96 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trre14g03167 Response_reg 6.4e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03167 K14492 - gmx:100814494 343.584