Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03119 ATGGCCAACGACAACAACAAGACCAAAGAAAAAGAGAATGATTTTTTCTTAGACGCTAATGAAGATGAAACTGATATCGAAGCTGTTAACTACGACAGTGACAATGATAATGATGATGAAGATTATGATCGCAATGAAACAGAACAACCTGAATCTTTCACTTCTCATCAATGGCCTCAAAGTTACAATGAGGCTATTGATCCTTTGACAATTGCTGCTGCACCAAATCTTGGATCAATATTCAAAGCACCGAGTGTTATTTATTCAAGCTTTTTAAATCTTGGATCAAGGAGTAACTTAGACTTACATGATGGAAAGACCCCTTTTTTATCTGGTGCTCAAATATCTGAAGGGGTTCCTAGACAATCAACATGGTGGGAGAAAGCTTCCATTCAAATGCATTTTCCTGAAGAATTGCCTATTGGTTATGGATGTACCTTCACTCAAACTATATTTAATGGGATTAATGTGATGGCTGGAGTTGGGCTTCTATCTACACCTGATACTATAAAGCAAGCTGGGTGGGCGAGTATGTTGGTGATGGTTATTTTTGCAGTTGTATGTTGTTATACAGCAGAGCTTATGAGACATTGCTTTCAAAACAGAGAAGGCATTGTTAGCTACCCAGATATAGGAGAAGCTGCATTTGGAAAATATGGCCGAGTTATTATATCAATCATTTTGTACACTGAATTATATTCATATTGTGTGGAATATATCATCATGGAAGGCGATAACCTTTCTGGTCTGTTTCCTGGAACATCCTTGAATTGGGGCAGTTTCAGTTTGAATGACAAGCACTTATTTTCAATTCTGACTGCACTTATTATTCTCCCTACTGTTTGGTTGAAGGATCTTCGTATAATCTCCTATCTCTCAGCTGGAGGGGTTATTGCTACAACTTTGATCGGTATGTGTGTGTTTGTTGTTGGGACAAGAAAGGATGTTGGATTCCATCAAACTGGTCCATTTGTGAAATGGAGTGGCATTCCATTTGCTTTTGGTATCTATGGATTTTGCTTTGCAGGACATTCAGTTTTTCCCAATATTTATCAATCTATGGCTAACAAAAAAGAATTTACCAAGGCAATGATCATATGTTTTGTTTTGCCCATGTTGTTATATGGAAGCATCGGAATCGCAGGATTTCTCATGTTTGGTGAAGGGACTTTGTCTCAGATAACATTGAATCTACCACGGGATGCATTTGCTACCAAATTTTCCATGTGGACTATAGCAATTCTACCGCTAACTAAATATCCTTTTCTATCATAA 1275 0.3757 MANDNNKTKEKENDFFLDANEDETDIEAVNYDSDNDNDDEDYDRNETEQPESFTSHQWPQSYNEAIDPLTIAAAPNLGSIFKAPSVIYSSFLNLGSRSNLDLHDGKTPFLSGAQISEGVPRQSTWWEKASIQMHFPEELPIGYGCTFTQTIFNGINVMAGVGLLSTPDTIKQAGWASMLVMVIFAVVCCYTAELMRHCFQNREGIVSYPDIGEAAFGKYGRVIISIILYTELYSYCVEYIIMEGDNLSGLFPGTSLNWGSFSLNDKHLFSILTALIILPTVWLKDLRIISYLSAGGVIATTLIGMCVFVVGTRKDVGFHQTGPFVKWSGIPFAFGIYGFCFAGHSVFPNIYQSMANKKEFTKAMIICFVLPMLLYGSIGIAGFLMFGEGTLSQITLNLPRDAFATKFSMWTIAILPLTKYPFLS 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03119 424 Pfam Transmembrane amino acid transporter protein 146 422 IPR013057 -
Trre14g03119 424 MobiDBLite consensus disorder prediction 17 46 - -
Trre14g03119 424 MobiDBLite consensus disorder prediction 1 59 - -
Trre14g03119 424 PANTHER OS05G0424000 PROTEIN-RELATED 150 407 - -
Trre14g03119 424 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03119 Trre-Chr14 38234300 38237843 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03119 3 423 Amino Acid or Auxin Permease AAAP Family AT2G41190 56.912 7.58e-170 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03119 K15015 - gmx:100790344 566.229