Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03106 ATGGGCAGTAGACTTAGAACTGCCGAGGATTCTAACAAGGTTGTCAACGGGATGCCAAGCTACGCCCCTCCATTACCACCTTCTAATTCCATGGGTATGGAAGGAAATATTCATCCTTCTCGACTTTCTGATTTTGGAGCCATCGAACAATCTCTTGGATTTCGCATTGAGGACGCCATGAATCTTAGCAGAAATCCCGTGTTTAATCAAATGAAATCAAATAGCCAAGTGCTAGGTGCTGATATTCAATTTGGTGCTTTAAGCAAGATACAGGCAATTGCAAACTCGGATACAATTGGTGGATCTCAGACATTGCAATTGCAAAAAGAGTCACAGCCAAATTTGGCTTCAACATCTGGCGGCCATCGTGAAAATTGGGGAGAGTCCAACGTGGCTGATGGAAGTGCTGATACTTCAACCGATGACACAGAAGACAAAAATCAAATGCCTGAAAGGGGAGAATCTAGTGAAAGATCAAAAGATAAATCGGATCAAAAGACGTTAAGAAGGTTAGCTCAAAATCGTGAGGCCGCCAGAAAAAGCCGATTGAGGAAAAAGGCATATGTGCAACAATTAGAGAGCAGTAGGCTGAAACTGACCCAACTGGAGCAAGAGCTACAGCGAGCACGCCAGCAGGGAATATTCATTTCAAGCACCGGAGAGCAGACACATTCAATGAGTGGAAATGGCGCAATGGCATTTGATGCCGAGTACGCACGATGGTTAGAAGAGCACAATAGGCAAACCAATGAGCTAAGGGCTGCAATAAATTCTCATGCTGGGGATATTGAACTCCGTACCATTGTCGACAATTTCATGACTCAATTTGAAGATATTTACAGGCTGAAAGGTGTTGCAGCTAAAGCTGATGTTTTCCACATTTTATCTGGAATGTGGAAGACTCCAGCTGAGAGGTGTTTCATGTGGATTGGAGGTTTCCGCTCATCCGAAATTCTTAAGCTTCTAGTAAGTCATTTGGAGCCTTTAACTGAGCAACAATTGATGGGAATCTACAACTTGCAACAGTCATCCCAACAGGCTGAAGATGCTCTCTCTCAAGGAATGGATGCATTGCAGCAATCACTTTCTGAGACATTAGCTAATGGTTCACCCAATCCATCAGGTTCTTCTGGAAATGTGGCGAACTACATGGGCCAAATGGCTATGGCCATGGGAAAACTCGGTACTCTCGAGGGGTTTCTTCGCCAGGCTGATAACCTGCGGCAGCAAACATTGCAACAAATGCTTCGGATATTAACAACCAGGCAATCAGCTCGAGCTCTTCTCGCAATAAGCGATTATTTCTCTCGACTGCGAGCACTGAGTTCTTTATGGCTTGCACGGCCAAGGGAGTGA 1356 0.4476 MGSRLRTAEDSNKVVNGMPSYAPPLPPSNSMGMEGNIHPSRLSDFGAIEQSLGFRIEDAMNLSRNPVFNQMKSNSQVLGADIQFGALSKIQAIANSDTIGGSQTLQLQKESQPNLASTSGGHRENWGESNVADGSADTSTDDTEDKNQMPERGESSERSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSTGEQTHSMSGNGAMAFDAEYARWLEEHNRQTNELRAAINSHAGDIELRTIVDNFMTQFEDIYRLKGVAAKADVFHILSGMWKTPAERCFMWIGGFRSSEILKLLVSHLEPLTEQQLMGIYNLQQSSQQAEDALSQGMDALQQSLSETLANGSPNPSGSSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMLRILTTRQSARALLAISDYFSRLRALSSLWLARPRE 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03106 451 Coils Coil 185 212 - -
Trre14g03106 451 MobiDBLite consensus disorder prediction 105 168 - -
Trre14g03106 451 Gene3D - 165 217 - -
Trre14g03106 451 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 164 208 IPR004827 GO:0003700|GO:0006355
Trre14g03106 451 SMART brlzneu 162 225 IPR004827 GO:0003700|GO:0006355
Trre14g03106 451 MobiDBLite consensus disorder prediction 139 168 - -
Trre14g03106 451 Pfam Basic region leucine zipper 162 208 IPR004827 GO:0003700|GO:0006355
Trre14g03106 451 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 169 184 IPR004827 GO:0003700|GO:0006355
Trre14g03106 451 CDD bZIP_HBP1b-like 166 218 - -
Trre14g03106 451 ProSiteProfiles DOG1 domain profile. 231 448 IPR025422 GO:0006351|GO:0043565
Trre14g03106 451 MobiDBLite consensus disorder prediction 105 137 - -
Trre14g03106 451 SUPERFAMILY Leucine zipper domain 166 209 IPR046347 GO:0003700|GO:0006355
Trre14g03106 451 Pfam Seed dormancy control 249 324 IPR025422 GO:0006351|GO:0043565
Trre14g03106 451 PANTHER TRANSCRIPTION FACTOR TGA9 123 451 - -
Trre14g03106 451 MobiDBLite consensus disorder prediction 1 30 - -
Trre14g03106 451 FunFam BZIP family transcription factor 165 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03106 Trre-Chr14 38166138 38170195 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03106 131 451 bZIP Transcription Factor Family AT3G12250 73.414 8.77e-169 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre14g03106 DOG1 3.6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03106 K14431 - gmx:778136 726.087