Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03036 ATGAGAGAAGACGATTCAAATTGGTTTTCAAGATGGGAAGAACAACTCCCTTCACCTGATGAACTCATGCCTTTATCACAAACCCTAATCACCCCTGATCTTGCCATAGCTTTCGACATCAGAAACAACATCAACAACAACAATAACCCACTCAACAACATTAACCACACAAATCCACAACAACAACATCATCAACATCAAAATCAACAACAGCAACAACAACCTCAACCTTCTTCACTTCCTTCTTCAACCGATTTCGCTGATTCCGGCGAACTAGGTTCCGGCACAGCCGGCGAAGAACCAGCAAGAACACTCAAAAGACCTCGTCTTGTATGGACCCCACAACTCCACAAACGTTTTGTCGATGCAGTGGCACATCTCGGAATCAAAAACGCTGTTCCAAAGACGATAATGCAGCTTATGAGTGTTGATGGTTTAACAAGAGAAAACGTTGCGAGTCACTTGCAAAAATATCGTCTTTATCTTAAACGCATGCAGGGAATTTCTTCCGGTGGAGGTGGTGGTTCTGGTGGTGGTTCTGCTGCTGTTAATGACCCTGCTACTGACCATTTATTTGCTAGCTCCCCTGTGCCGCCGCATTTTCTTCATCCGGTTGCTCGGCCTAATTCGGATCATTTTATGCCTTTTGTTCCTGTTCCTGCTATTCATCATCAGCAGCAGATGGCTGCTGCTGCTGCTGCTCAGTATCACCGGCCGGCCGGGCATTTTGGGTCGCCGCCGAATGGACATTTTGAGAATCCTTTCTTGTCTAGACAGCAACAGCAACAGCATCAACAGCAACAGCAACATCAGCATCAGCAGCAGCTTCATAGGATTGGTGGACAAATGCATCATAATCCTGTTGGTGGTTATGTGGAGGATATGGAGTCAGCTAATGCATCAGGAGGGAGGAAGGTTCTTACTTTGTTTCCAACAGGAGATGATTGA 948 0.4589 MREDDSNWFSRWEEQLPSPDELMPLSQTLITPDLAIAFDIRNNINNNNNPLNNINHTNPQQQHHQHQNQQQQQQPQPSSLPSSTDFADSGELGSGTAGEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISSGGGGGSGGGSAAVNDPATDHLFASSPVPPHFLHPVARPNSDHFMPFVPVPAIHHQQQMAAAAAAQYHRPAGHFGSPPNGHFENPFLSRQQQQQHQQQQQHQHQQQLHRIGGQMHHNPVGGYVEDMESANASGGRKVLTLFPTGDD 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03036 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 112 163 IPR017930 -
Trre14g03036 315 FunFam Two-component response regulator 103 166 - -
Trre14g03036 315 Pfam Myb-like DNA-binding domain 111 159 IPR001005 -
Trre14g03036 315 Gene3D - 104 166 - -
Trre14g03036 315 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 295 IPR044841 GO:0003700|GO:0006355
Trre14g03036 315 SUPERFAMILY Homeodomain-like 104 164 IPR009057 -
Trre14g03036 315 NCBIfam myb-like DNA-binding domain, SHAQKYF class 108 160 IPR006447 GO:0003677
Trre14g03036 315 MobiDBLite consensus disorder prediction 238 315 - -
Trre14g03036 315 MobiDBLite consensus disorder prediction 252 280 - -
Trre14g03036 315 MobiDBLite consensus disorder prediction 47 106 - -
Trre14g03036 315 MobiDBLite consensus disorder prediction 47 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03036 Trre-Chr14 37020316 37021263 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03036 1 315 G2-like Transcription Factor Family AT3G10760 57.703 4.73e-101 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Trre14g03036 Myb_DNA-binding 2.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03036 - - ccaj:109802866 414.846