Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03034 ATGTGTAGAGAGACTGAGAGCTGCACGAGCAGCAGCAGCAGCAACAGTCAACGGAGAGCGGAGGAAGTGATTATTGGAAACGCAAAAGCTATTCAAAAACATAGAGAACTCATAACATTACCTCTTCTCTTCCCTCACGAGGCAAATAAGTTGCAAACAGGGTTGTTGCTGTGTGGTCCTCCTGGCACTGGAAAGAGAAGTTTAGTACAGGCAGTTGTTGAGGAATGTGGAGCAACTTTGACAACTATCAGCCCAGACACTGTTTACAGCGCAAATGCGGGTGAAAGTGAGAGAACTCTCCGTGAGGCTTTTTCAGAGGCATCATCTCACACAGCCTTGGGCAAGTCCTCAGTTATCTTTATAGATCAAATAGATACACTTTGTCCTCCCCGAAATTCCAAGAGAGGGCAAGATGTCCGAATTGCTTCCCAACTTGGTATTTTGATGGACTCAAGCAAAGCAACCTCTTCTACGCCAGGGGTAGTCGTGGTTGCATCAACTAACAGTGTTGATGCAATTGACCCTGCTTTAAGAAGATATGGACGTTTTGATATTGAAACTGAAGTTACAGTCCCAAATAAAAAGGAGCGCCTTCAAATTCTAGAGCTGTATACAAGAAAGATCCCTCGGAATTCATGCGACTTAGAATCCATTGCTGCATCATGCAATGGATATGTCGGAGCTGATTTATGGGCTTTGTGTCGTGAAGCTATCAAATCTGCAGTTAGAAGGTCTTTAAATGCAAAGAAAGATGTCAAAAAAGACTCTAGTTTAACTATGGAAGATTGGAAGAATGCAAGTTCTCTTGTTCAACCAAGTATAACAAGAGGCATTACTGTGGAAATTCCCGATGTGACTTGGAAAGATATTGGTGGATTGAAAGATGTGAAGACAAAGCTCAAGCAAGCTGTTGAGTGGCCTTTGAAGCATCCTGCTGCGTTTTCAAGATTGGGAATAACCCCTAATCGTGGAATTCTTCTCCATGGGCCTCCAGGATGTTCCAAAACTACTCTTGCTAAAGCTGCTGCAAATGCTGCTAATGTTCCTTTCTTTTCCTTGAGTTGTGCAGATGTGCGTTCAAAGTATGTTGGAGATGCAGAAGGTTATCTTCGTGAAATATTTCGCAAAGCACGGCTTGCCGGAAAAAGTATAATATTTTTTGATGAAGTTGATTCAGTAGCTGGCAAACGGGGTGATAGTTCGAGCAGTAGTTCCGCAGCTGATGAGAGGCTTTTATCTACTCTGCTAACTGAGATGGATGGTTTAGAAGAAGCCAAAGGCGTCCTTGTTTTTGCAGCTACGAATCGCCCTTATTTACTTGATGCCGCACTTATGCGTCCTGGACGATTTGATATGATTTTGTATGTGCCACCACCTGATTTGGAGGGTCGATTGGAGATACTTAACGTACACACACGTAGGATGAAATTACAGAGTGATGTTGATCTTAGAAAACTAGCAGAAGATACCGAGCTCTTCACAGGTGCAGAGCTAGCGGGATTGTGTAGAGAAGTTGGAACAGCAGCTCTAAGGGAAAACATTGATGCAAGTGTTGTTTTTGACCGTCACTTCCAGATTGTTAAGAATGCTTTAAATCCAACATTAACAAAAGAAGCAATTGATTCATACTCGTCGTTTAGGAAGACCTCATCTCGAAGTGTTGCCTAG 1668 0.4293 MCRETESCTSSSSSNSQRRAEEVIIGNAKAIQKHRELITLPLLFPHEANKLQTGLLLCGPPGTGKRSLVQAVVEECGATLTTISPDTVYSANAGESERTLREAFSEASSHTALGKSSVIFIDQIDTLCPPRNSKRGQDVRIASQLGILMDSSKATSSTPGVVVVASTNSVDAIDPALRRYGRFDIETEVTVPNKKERLQILELYTRKIPRNSCDLESIAASCNGYVGADLWALCREAIKSAVRRSLNAKKDVKKDSSLTMEDWKNASSLVQPSITRGITVEIPDVTWKDIGGLKDVKTKLKQAVEWPLKHPAAFSRLGITPNRGILLHGPPGCSKTTLAKAAANAANVPFFSLSCADVRSKYVGDAEGYLREIFRKARLAGKSIIFFDEVDSVAGKRGDSSSSSSAADERLLSTLLTEMDGLEEAKGVLVFAATNRPYLLDAALMRPGRFDMILYVPPPDLEGRLEILNVHTRRMKLQSDVDLRKLAEDTELFTGAELAGLCREVGTAALRENIDASVVFDRHFQIVKNALNPTLTKEAIDSYSSFRKTSSRSVA 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03034 555 Gene3D - 275 459 IPR027417 -
Trre14g03034 555 FunFam spermatogenesis-associated protein 5-like protein 1 459 545 - -
Trre14g03034 555 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 283 516 IPR027417 -
Trre14g03034 555 FunFam Cell division control protein 48-B-like protein 275 459 - -
Trre14g03034 555 Gene3D - 460 551 - -
Trre14g03034 555 Pfam AAA+ lid domain 214 262 IPR041569 -
Trre14g03034 555 Pfam AAA+ lid domain 480 524 IPR041569 -
Trre14g03034 555 ProSitePatterns AAA-protein family signature. 428 446 IPR003960 GO:0005524|GO:0016887
Trre14g03034 555 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 275 IPR027417 -
Trre14g03034 555 PANTHER AAA-FAMILY ATPASE 20 550 - -
Trre14g03034 555 Gene3D - 192 274 - -
Trre14g03034 555 Pfam ATPase family associated with various cellular activities (AAA) 325 457 IPR003959 GO:0005524|GO:0016887
Trre14g03034 555 Pfam ATPase family associated with various cellular activities (AAA) 55 189 IPR003959 GO:0005524|GO:0016887
Trre14g03034 555 Gene3D - 7 190 IPR027417 -
Trre14g03034 555 SMART AAA_5 51 193 IPR003593 GO:0016887
Trre14g03034 555 SMART AAA_5 321 460 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03034 Trre-Chr14 36945965 36951475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03034 257 534 Calmodulin-binding Proteins AT3G56690 45.324 3.72e-78 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03034 - - gmx:100814288 692.189