Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03030 ATGAAGAAAGAAAAGTTGATTCGTGAAGCTAGCCATATTTCTGGATTTGCTGTGCATTCCAGGAATAAAAGGGATGATATTAAAAAAATAGTAGATCATGTTACTGATTTACTAAACAGGAGAGACTTATTCGTTGCTGACCATCCAGTGGGTGTAGAATCTCGTGTACAAGATGTTATCCAACTATTGAACAGTCAAGAATCAAAAGACCCTCTACTTCTCGGGATATGGGGCATGGGAGGGATCGGTAAAACAACCATTGCTAAAGCTGTTTATAATAAAATCCATCGCGATTTTGAGGCAAAGAGCTTCCTCCTAAATGTCAGGGAAGTTTGGAAACAAGACAATGGCAAAGTTTCTCTACAACAAAAACTTCTTTCTGATATCTACAAAACAACAAATGTAAAGATAGACACGGTTGAATCAGGGAAAATGATATTGCAGGATATACTTTGTCAAAAGAGGATATTTCTTGTGCTTGATGATGTGAATGGATTGGATCAATTGAATGCTCTGTGCGGAAGTCGCAAATGGTTTGGTCAAGGAAGTAAAATAATCATCACTACAAGAGATGATGATTTGCTTTGTAGGCTTAAAGTTGACCATTCATATAAAATGAAAGAAATGGATGACAATGAATCTATTGAGCATTTTAATTGGCATGCATTCAAGCAACCAAATCCCATCGAAGGTTTTGCTGACCTTTCTAGAGATGTTGTTATGTACTCTAGGGGATTGCCACTATCTCTTCAAGTCATGGGATCCTCTTTGTCGACTAGGAAAACCAAAACAGAGTGGACGAGTGAATTGAAGAAACTAAAATCCATTGACATTGATGCTGACAATGTGCATCAGGTGCTGAGTTTGAGTTTTGATAATTTATCCGACAATGATCTCAAAGAAACATTCTTGAATATAGCTTGTTTGAACTTAAGTGGCATGTACAGGGATGATTTAATTCAGATATTTGAAAAGGATGGGCATTTCACAAAACGTGGATTGAATACTCTCGTACAAAGTTGCCTTGTAGATGTAGATAGTGAGAATATGATTAAAATGCATGTTTTGGTAGAAGAAGTGGGAAGAAAAATCAGAAAGGAAAAATCAACGGCTATGGCTGAGGGAAAGATTTATGATGTGTTCTTGAGTTTCAGAGGGGAAGATACTCGTGCGAAATTCATTTCACATCTCTACGCCTCTCTACAAAATGCTGGAATTTATGTTTTTAGAGACGATGATGAGATTCAACGAGGTGATCGGATCTCGGTCTCACTGTTGCAAGCAATTGGAAAGTCTAGAATTTCTATTGTTGTTTTGTCTAGAAATTATGCTAATTCAAGATGGTGTATGCTAGAGCTGGAGAACATCATGGACATTAGCAGAACGCAGGGTATGGTGGTTGTACCAGTGTTCTATGAGATAGGTCCCTCAGAAGTACGCCATCAAACAGGAAAGTTTGGAGAAGATTTTGGATCTCTCGTATCAAGAATCGCATCGGATACAGACTCAACAAAGTTGATTAACTGGAAAACAGCACTCACCGAAGTCGGTGGCACAGCAGGAGTTGTCATCATAAATTCTAGGAATGAAAGTGAGGACATCAGGAAAGTAGTAGACCATGTTACTAATTTACTAGACAGGACAGACTTATTCGTTGCAGACCATCCAGTGGGGGTAGAATCTCGTGTACAAGATGTTATTCAATTACTGAACAACCAACAATCAAAAGATACTCTACTGCTTGGGATATGGGGCATGGGAGGGATTGGCAAAACAACACTTGCTAAAGCTGCTTATAATAAAATCCGGCACGATTTTGAGGCAAAGAGCTTCCTCCTAAATGTCAGGGATGTTTGGGAACAAGATAATGGCAAAGTTTCTCTACAACAACAACTTCTTTCTGATATCTACAAAACAACAAAGATAAATATAGATACGGTTGAATCAGGGAAAGTGATATTACAAGAAAGGCTTCACCAGAAGAGAATGTTTCTTGTGCTTGACGATATGAATAAAGTGGACCAATTGAATGCTTTGTGCGGAAGTCGCGAATGGTTTGGTAAAGGAAGTAGAATAATTATCACAACAAGAGATGATGATATACTTCGGAGGCTTGAAGCTGACTATGTATATAGAATGAATGAAATGGATGACAATGAGTCTCTTGAGCTTTTTTGTTGGCATGCATTCAAGCAACCAATTCCTGTAGAAGGTTTTGCTGACCTTTCTAGAGATGTTGTTAAGTACTCTGGTGGATTTCCGCTAGCTCTTCAAGTCATTGGGTCCTTTTTGTTGACTAGGCGAAGAAAAAATGAATGGAAGGATGTATTGGGGAAATTAATACTCATTCCCAATGATGAAGTGTTAGAGAAGCTTAGAATTAGTTTTGACGGTTTATGTGATGATGATATGAAAGAAATATTCCTTGATATTGCCTTTTTCTTTATTGGGATGGACCAGGAAGATGTAATTACAATATTGAAAGATTGTGGGCATTATGCAGATATTGGAATAAGTGTCCTTGTACAACAAAGCCTTATAACTGTTGATCGGAAGAACAAGATTGGAATGCATGATTTGCTACGTGACATGGGAAAAGCGATTGTACGTAAGAAATCAACAGAGGGAGGCAGGGTGCCTAGTAGGTTATGGCATTACGAGGAAGTTAATTATGTGTTGTCAAAAGATACTAGAACCTTAGATGTGAAGGGTCTGACTTTAAAGATGTCAAGAAAGGACTCCACAATATGTTTGGAAACTAAACCATTTCAGAAGATGGATAAACTTAAATTGCTTCAACTTGCTGGCGTGCGCCTTAGTGGAGATTATAGATATCTTTCAAAAGATCTTCGATGGCTTTGTTGGCATGGATTTCCTTTAAAATGTACACCAGCAGACTTCTATCAAGAACATTTAGTTGTTGTTGACTTAAAATATTCCAATCTGGAACGAGTGTGGAAGAAGTCCCAGTTTCTGAAGGAACTGAAATTTCTTAATCTTAGTCATTCTCATAACTTGAGACAAACCCCAGACTTTTCAAACTTGCCAAATCTCGAAAAGTTAATACTTAAAGATTGTCCAAGTTTGTCCTCGGTTTCTCCTACTATAGGAAATCTCAAGAAAATTCTTTTAATAAACTTGAAAGACTGTACAGGCCTTCGAAAACTTCCAAGAAGCATATATAAGTTAGAGTCTGTAAAAACTCTCATTGTGTCTGGATGTACAAAAATTGACAAGTTGGAAGAGGACATAGAACAGATGACATCTTTGACCACCCTGGCTGCAGATAACACTGCTATAACAAGAGTACCCTTTGCAGTAGTAAGATCAAAAAGTATTGGATATATTTCACTGTGTGGATTCAAAGGATTTGCACGTAATGTGTTTCCTTCAATTATTCAGTCTTGGATGTCTCCAACAAATGATGACCAAAATGATAATTTCTATGGTCTACCATCTATTTTTAACGATCTTCAGAATCTTCAGCGTCTTTGGTTGAAATGCAAGTCAGAAGCTGAACTAAATCAAACTCTAGTAAGTATTCTGGATAACTTACATACCAAAGGCTGTGGGGAATTGGAAGCAATGCCTTACACATCACAATCCTCAAATTTTGTGACTTCAGCATCCACTCGCTGTTGCAGTCAAGTTCAAATATCAAGCTCACAAAATTCCTTGACTTCGCTTTTAATTCAAATGGGAATGAACTGTCATGTCAATAATACTCTTAGAGAAAACATTTTACAGAAAATGCCTCCCAAAGGGTCTGGTTTACTCCTTGGTGACAATTATCCTGATTGGCTATCCTTCAATGATAATGGTTCTTCTGTAACTTTTGAAGTACCTCAAGTGGATGAGCACAATTTGAAAACAATCATGTGCGTTGTCTATTCTTCTTCTCCAGATGATATCACATCAGGAGGCCTTAAGGTTTTGTTGGTGATAAATTACACAAAGAACACAATTCAGCTCTATAAGAGAGACGGATTATCAGCCTCTGCTGATGAAGAGGAGTGGCAGAAAGTAGTATCAAATACAGAACCAGGTGACATAATCAAGATTATTGTTGTTTTTGAAAACAAATTTATCGTGAAGAAGACAACAGTTTATCTTATCTATGACAAGAAGACAAACCACCGTCTTGAATCGGATAAGAATATATTTGGTAAACTCTTCTTCAGACTTCCTCCCCTTGTTCGAGCCGTTCTGATTTCACGACCTTTCTGGTTCTGTTTGGCTGTTATTATGGTTTGGTGGTCTCGCTTCCATTCTAACAAACGAAGAAGTTTAAGCCCTTGTATTAATAATGATTTTGTTTTGCTGATATTTGACCTACTTCCTGCTATTCACTATTTTGACATGAAACAGGAAATGGCACCCAAAGCTCTCAAGGATTCTGTACTCCAGTATCAAGGGACAAAATTACTTTGGATGATGTACAACAAGATTTTAAATCGTTGTCGCGGTGGTTAA 4473 0.3758 MKKEKLIREASHISGFAVHSRNKRDDIKKIVDHVTDLLNRRDLFVADHPVGVESRVQDVIQLLNSQESKDPLLLGIWGMGGIGKTTIAKAVYNKIHRDFEAKSFLLNVREVWKQDNGKVSLQQKLLSDIYKTTNVKIDTVESGKMILQDILCQKRIFLVLDDVNGLDQLNALCGSRKWFGQGSKIIITTRDDDLLCRLKVDHSYKMKEMDDNESIEHFNWHAFKQPNPIEGFADLSRDVVMYSRGLPLSLQVMGSSLSTRKTKTEWTSELKKLKSIDIDADNVHQVLSLSFDNLSDNDLKETFLNIACLNLSGMYRDDLIQIFEKDGHFTKRGLNTLVQSCLVDVDSENMIKMHVLVEEVGRKIRKEKSTAMAEGKIYDVFLSFRGEDTRAKFISHLYASLQNAGIYVFRDDDEIQRGDRISVSLLQAIGKSRISIVVLSRNYANSRWCMLELENIMDISRTQGMVVVPVFYEIGPSEVRHQTGKFGEDFGSLVSRIASDTDSTKLINWKTALTEVGGTAGVVIINSRNESEDIRKVVDHVTNLLDRTDLFVADHPVGVESRVQDVIQLLNNQQSKDTLLLGIWGMGGIGKTTLAKAAYNKIRHDFEAKSFLLNVRDVWEQDNGKVSLQQQLLSDIYKTTKINIDTVESGKVILQERLHQKRMFLVLDDMNKVDQLNALCGSREWFGKGSRIIITTRDDDILRRLEADYVYRMNEMDDNESLELFCWHAFKQPIPVEGFADLSRDVVKYSGGFPLALQVIGSFLLTRRRKNEWKDVLGKLILIPNDEVLEKLRISFDGLCDDDMKEIFLDIAFFFIGMDQEDVITILKDCGHYADIGISVLVQQSLITVDRKNKIGMHDLLRDMGKAIVRKKSTEGGRVPSRLWHYEEVNYVLSKDTRTLDVKGLTLKMSRKDSTICLETKPFQKMDKLKLLQLAGVRLSGDYRYLSKDLRWLCWHGFPLKCTPADFYQEHLVVVDLKYSNLERVWKKSQFLKELKFLNLSHSHNLRQTPDFSNLPNLEKLILKDCPSLSSVSPTIGNLKKILLINLKDCTGLRKLPRSIYKLESVKTLIVSGCTKIDKLEEDIEQMTSLTTLAADNTAITRVPFAVVRSKSIGYISLCGFKGFARNVFPSIIQSWMSPTNDDQNDNFYGLPSIFNDLQNLQRLWLKCKSEAELNQTLVSILDNLHTKGCGELEAMPYTSQSSNFVTSASTRCCSQVQISSSQNSLTSLLIQMGMNCHVNNTLRENILQKMPPKGSGLLLGDNYPDWLSFNDNGSSVTFEVPQVDEHNLKTIMCVVYSSSPDDITSGGLKVLLVINYTKNTIQLYKRDGLSASADEEEWQKVVSNTEPGDIIKIIVVFENKFIVKKTTVYLIYDKKTNHRLESDKNIFGKLFFRLPPLVRAVLISRPFWFCLAVIMVWWSRFHSNKRRSLSPCINNDFVLLIFDLLPAIHYFDMKQEMAPKALKDSVLQYQGTKLLWMMYNKILNRCRGG 1490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03030 1490 Gene3D Ribonuclease Inhibitor 882 1055 IPR032675 -
Trre14g03030 1490 SUPERFAMILY L domain-like 857 1172 - -
Trre14g03030 1490 PRINTS Disease resistance protein signature 580 595 - -
Trre14g03030 1490 PRINTS Disease resistance protein signature 657 671 - -
Trre14g03030 1490 PRINTS Disease resistance protein signature 990 1006 - -
Trre14g03030 1490 PRINTS Disease resistance protein signature 750 764 - -
Trre14g03030 1490 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 542 811 IPR027417 -
Trre14g03030 1490 Gene3D Ribonuclease Inhibitor 1056 1239 IPR032675 -
Trre14g03030 1490 SMART till_3 377 519 IPR000157 GO:0007165
Trre14g03030 1490 Pfam TIR domain 378 543 IPR000157 GO:0007165
Trre14g03030 1490 Gene3D - 33 202 IPR027417 -
Trre14g03030 1490 Gene3D - 544 710 IPR027417 -
Trre14g03030 1490 ProSiteProfiles TIR domain profile. 376 545 IPR000157 GO:0007165
Trre14g03030 1490 SUPERFAMILY Toll/Interleukin receptor TIR domain 372 521 IPR035897 -
Trre14g03030 1490 Gene3D - 715 800 IPR042197 -
Trre14g03030 1490 Gene3D - 208 295 IPR042197 -
Trre14g03030 1490 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 378 1215 IPR044974 GO:0006952
Trre14g03030 1490 SMART AAA_5 70 210 IPR003593 GO:0016887
Trre14g03030 1490 SMART AAA_5 577 720 IPR003593 GO:0016887
Trre14g03030 1490 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 305 IPR027417 -
Trre14g03030 1490 FunFam Disease resistance protein (TIR-NBS-LRR class) 374 547 - -
Trre14g03030 1490 Gene3D - 376 543 IPR035897 -
Trre14g03030 1490 Pfam NB-ARC domain 53 293 IPR002182 GO:0043531
Trre14g03030 1490 Pfam NB-ARC domain 560 780 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03030 Trre-Chr14 36895053 36905246 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03030 2 370 WRKY Transcription Factor Family AT4G12020 26.810 1.81e-28 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03030 - - mtr:11408937 2186.38