LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre14g03029	ATGGCTGACCCAATCCTCTCCGATCAACCACCGGAACAACAACCGTCGTCCGATCTCGATTACGACTTCGCCGGCCAATTCAACAACGTCCCTATCCCTTCATTAGATTTTTTATTCAACGACGATCTTGGAGATCTTGAGATCACGTTCGACGATCTGGATAATCTCTGTATCCCTTCTGATACCGAAGATTTTCTTCTTCCCGATTCATGGAACCCTAACGGTGTTCCAGTTTCGCCTATCATTGATAATAATCAAGGCGATGTTAATTTTGATTCGCCGGAATCAGGTGCTTCTGTTGTTTCCGGTGATCAGAGTCCAGATGTTTCTAGGTTTCTCAATTCAGATTCGGTTTCTGCTGATGATAATGATAATTCAGTTGATGTTGATGTTAAAGTTTCGACGGAGACTGAAAATGCTGAGAATTCTGACCAGGAAGAGTCTTCGAATGGACCGGTTTCGTCTCAGGGATCAGGGAATGGCGGATCGGGTGTATATGAAGCGATGAATTCGCCCTCACATGATTCTGGCCGTTATGAGAGGGATATTTCATCTTCCCATGAACATGCAACTGTGGAAGAGGGTGTGAAATTGGAAGGAATTGTTAAAGGATGTGATCTGAAGAGGAAGAAAGAAAGTAGCCATGAAAGTGCTGAGACTCGAACTCCGAAATGTAGCAGGAGATCCTCTTCAATGGAAATCAAGACTCAGCAACAACAACAACAGCAACAAGCTCAATCTCAATCTCAATCTGGTTTTGATGGTATTGAAGATGAGGATGAGAAGAGGAAGGCAAGGTTGATGAGGAATAGAGAAAGTGCACAGCTTTCTAGGCAGAGGAAGAAGCATTATGTGGAGGAGCTTGAGGAGAAGGTAAGATCAATGCATTCAACAATTGCTGATTTGAGTAGCAAGATTACATATGTTATGGCTGAGAATGCTACACTTAGACAACAATTGAGTGGTGGTGTGATGTGTCCACCACCTCCGCCGGGTGCTGGGATGTACCCTCATCCTCCAATGGCACCCATGCCTTATCCATGGATGCCTTGTGCTCCTTATGTTGTTAAACCTCAAGGTTCTCAGGTTCCTTTGGTCCCAATTCCAAGGTTAAAGCCTCAGCAACCAGCTGCGTCTTCCAAGAGTAAAAAGAGTGAGAGTAAGAAAACTGAGGTGAAAACTAAGAAGGTTGCTAGTATTAGTTTGTTGGGTTTGTTTTTCTGTATTATGCTTTTTGGTGGACTTGTTCCTATGGTAGATTTTAAGTTTGGAGGTTTAGTTGATAATGTTTCTGGTAGGTCTAGTTATGTTAGTGATAGATGGTTTTATGGTCATGGTGGAGGGAAGATTTGGCCTGTAAATGGTCATATGAATGAATCTGGAAGGGATGGAGAAGTGGGGTCTCCCAATGGAAGGTTTGGTATTTCCGATAGGAATACTTATGAAAGAGGTCGGAAACTAGGAGAAGAAATGAATGAACGGAAAGACTCGAGTTGTTTTGGTCATCGAGACAATGCCAGCGAACCACTTCTAGCTTCTTTGTATGTTCCTAGGAATGATAAGCTGGTGAAGATTGATGGAAACTTGATAATCCATTCTATTATGGCCAGTGAGAAAGCCAAGGCATCTCAAGATGCTCAGGTAAAGAAGGAGAAGAGTGAAACTGGTTTGGCCATTCCTAAAGATTGGGATTCTGCATTGGCTATTCCTGAAGTTGGAAGAAATAGAGGACAGCATCCAAATGTGTACAGAGTTTCTGCAGAACAGAGGAGGGCTATTGGCTCTGGTTCAGCTAAAACCTTGAAGGACCATATGAAGTCTTCTGCAACTGATGGTAAAATGCAGCAGTGGTTCCGTGAAGGAATTGCAGGTCCAATGCTAAGTTCTGGCATGTGTACTGAAGTTTTTCAGTTTGATGTTTCTCCCGCTCCTGGAGCTATTGTTCCAGCAACGGCAGTGGGCAATATTTCTACTGAAACTCGTCGTAATGCCACCAATATCAACAAGAGCAGGAACAGAAGAATCCTCCACACCCTCCCAGATCCACTTCCTGGAACCCGTCTGAACATAACTGAAGAACATGCAAGAAATTTGCCGAAAGACCACCTCCCTGGTAATAAATCGTCTATGGTGGTTTCTGTGCTTGTTGATCCAAAAGAGGACAGTGATGTTGATGGAATGATGGCTCCAAAGCCGCTCTCTCGGATTTTTGTGGTCGTGCTAATAGATAGTGTCAAGTATGTGACTTACTCATGTGGTCTTCCCCGCGCTTCTCCTTTGGTGACTGCTTATGTTTGA	2298	0.4369	MADPILSDQPPEQQPSSDLDYDFAGQFNNVPIPSLDFLFNDDLGDLEITFDDLDNLCIPSDTEDFLLPDSWNPNGVPVSPIIDNNQGDVNFDSPESGASVVSGDQSPDVSRFLNSDSVSADDNDNSVDVDVKVSTETENAENSDQEESSNGPVSSQGSGNGGSGVYEAMNSPSHDSGRYERDISSSHEHATVEEGVKLEGIVKGCDLKRKKESSHESAETRTPKCSRRSSSMEIKTQQQQQQQQAQSQSQSGFDGIEDEDEKRKARLMRNRESAQLSRQRKKHYVEELEEKVRSMHSTIADLSSKITYVMAENATLRQQLSGGVMCPPPPPGAGMYPHPPMAPMPYPWMPCAPYVVKPQGSQVPLVPIPRLKPQQPAASSKSKKSESKKTEVKTKKVASISLLGLFFCIMLFGGLVPMVDFKFGGLVDNVSGRSSYVSDRWFYGHGGGKIWPVNGHMNESGRDGEVGSPNGRFGISDRNTYERGRKLGEEMNERKDSSCFGHRDNASEPLLASLYVPRNDKLVKIDGNLIIHSIMASEKAKASQDAQVKKEKSETGLAIPKDWDSALAIPEVGRNRGQHPNVYRVSAEQRRAIGSGSAKTLKDHMKSSATDGKMQQWFREGIAGPMLSSGMCTEVFQFDVSPAPGAIVPATAVGNISTETRRNATNINKSRNRRILHTLPDPLPGTRLNITEEHARNLPKDHLPGNKSSMVVSVLVDPKEDSDVDGMMAPKPLSRIFVVVLIDSVKYVTYSCGLPRASPLVTAYV	765

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre14g03029	765	MobiDBLite	consensus disorder prediction	69	282	-	-
	Trre14g03029	765	MobiDBLite	consensus disorder prediction	140	170	-	-
	Trre14g03029	765	FunFam	bZIP transcription factor 49	261	323	-	-
	Trre14g03029	765	MobiDBLite	consensus disorder prediction	9	23	-	-
	Trre14g03029	765	MobiDBLite	consensus disorder prediction	255	282	-	-
	Trre14g03029	765	Gene3D	-	260	322	-	-
	Trre14g03029	765	MobiDBLite	consensus disorder prediction	125	139	-	-
	Trre14g03029	765	Pfam	bZIP transcription factor	261	320	IPR004827	GO:0003700\|GO:0006355
	Trre14g03029	765	PANTHER	BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED	37	760	-	-
	Trre14g03029	765	MobiDBLite	consensus disorder prediction	174	228	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre14g03029	Trre-Chr14	36881590	36884627	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre14g03029	1	763	bZIP Transcription Factor Family	AT2G40950	47.222	1.33e-172	512

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Trre14g03029		bZIP_1	9.6e-12	CL0018

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre14g03029	K25783		-	gmx:100101871	865.914

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