Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03029 ATGGCTGACCCAATCCTCTCCGATCAACCACCGGAACAACAACCGTCGTCCGATCTCGATTACGACTTCGCCGGCCAATTCAACAACGTCCCTATCCCTTCATTAGATTTTTTATTCAACGACGATCTTGGAGATCTTGAGATCACGTTCGACGATCTGGATAATCTCTGTATCCCTTCTGATACCGAAGATTTTCTTCTTCCCGATTCATGGAACCCTAACGGTGTTCCAGTTTCGCCTATCATTGATAATAATCAAGGCGATGTTAATTTTGATTCGCCGGAATCAGGTGCTTCTGTTGTTTCCGGTGATCAGAGTCCAGATGTTTCTAGGTTTCTCAATTCAGATTCGGTTTCTGCTGATGATAATGATAATTCAGTTGATGTTGATGTTAAAGTTTCGACGGAGACTGAAAATGCTGAGAATTCTGACCAGGAAGAGTCTTCGAATGGACCGGTTTCGTCTCAGGGATCAGGGAATGGCGGATCGGGTGTATATGAAGCGATGAATTCGCCCTCACATGATTCTGGCCGTTATGAGAGGGATATTTCATCTTCCCATGAACATGCAACTGTGGAAGAGGGTGTGAAATTGGAAGGAATTGTTAAAGGATGTGATCTGAAGAGGAAGAAAGAAAGTAGCCATGAAAGTGCTGAGACTCGAACTCCGAAATGTAGCAGGAGATCCTCTTCAATGGAAATCAAGACTCAGCAACAACAACAACAGCAACAAGCTCAATCTCAATCTCAATCTGGTTTTGATGGTATTGAAGATGAGGATGAGAAGAGGAAGGCAAGGTTGATGAGGAATAGAGAAAGTGCACAGCTTTCTAGGCAGAGGAAGAAGCATTATGTGGAGGAGCTTGAGGAGAAGGTAAGATCAATGCATTCAACAATTGCTGATTTGAGTAGCAAGATTACATATGTTATGGCTGAGAATGCTACACTTAGACAACAATTGAGTGGTGGTGTGATGTGTCCACCACCTCCGCCGGGTGCTGGGATGTACCCTCATCCTCCAATGGCACCCATGCCTTATCCATGGATGCCTTGTGCTCCTTATGTTGTTAAACCTCAAGGTTCTCAGGTTCCTTTGGTCCCAATTCCAAGGTTAAAGCCTCAGCAACCAGCTGCGTCTTCCAAGAGTAAAAAGAGTGAGAGTAAGAAAACTGAGGTGAAAACTAAGAAGGTTGCTAGTATTAGTTTGTTGGGTTTGTTTTTCTGTATTATGCTTTTTGGTGGACTTGTTCCTATGGTAGATTTTAAGTTTGGAGGTTTAGTTGATAATGTTTCTGGTAGGTCTAGTTATGTTAGTGATAGATGGTTTTATGGTCATGGTGGAGGGAAGATTTGGCCTGTAAATGGTCATATGAATGAATCTGGAAGGGATGGAGAAGTGGGGTCTCCCAATGGAAGGTTTGGTATTTCCGATAGGAATACTTATGAAAGAGGTCGGAAACTAGGAGAAGAAATGAATGAACGGAAAGACTCGAGTTGTTTTGGTCATCGAGACAATGCCAGCGAACCACTTCTAGCTTCTTTGTATGTTCCTAGGAATGATAAGCTGGTGAAGATTGATGGAAACTTGATAATCCATTCTATTATGGCCAGTGAGAAAGCCAAGGCATCTCAAGATGCTCAGGTAAAGAAGGAGAAGAGTGAAACTGGTTTGGCCATTCCTAAAGATTGGGATTCTGCATTGGCTATTCCTGAAGTTGGAAGAAATAGAGGACAGCATCCAAATGTGTACAGAGTTTCTGCAGAACAGAGGAGGGCTATTGGCTCTGGTTCAGCTAAAACCTTGAAGGACCATATGAAGTCTTCTGCAACTGATGGTAAAATGCAGCAGTGGTTCCGTGAAGGAATTGCAGGTCCAATGCTAAGTTCTGGCATGTGTACTGAAGTTTTTCAGTTTGATGTTTCTCCCGCTCCTGGAGCTATTGTTCCAGCAACGGCAGTGGGCAATATTTCTACTGAAACTCGTCGTAATGCCACCAATATCAACAAGAGCAGGAACAGAAGAATCCTCCACACCCTCCCAGATCCACTTCCTGGAACCCGTCTGAACATAACTGAAGAACATGCAAGAAATTTGCCGAAAGACCACCTCCCTGGTAATAAATCGTCTATGGTGGTTTCTGTGCTTGTTGATCCAAAAGAGGACAGTGATGTTGATGGAATGATGGCTCCAAAGCCGCTCTCTCGGATTTTTGTGGTCGTGCTAATAGATAGTGTCAAGTATGTGACTTACTCATGTGGTCTTCCCCGCGCTTCTCCTTTGGTGACTGCTTATGTTTGA 2298 0.4369 MADPILSDQPPEQQPSSDLDYDFAGQFNNVPIPSLDFLFNDDLGDLEITFDDLDNLCIPSDTEDFLLPDSWNPNGVPVSPIIDNNQGDVNFDSPESGASVVSGDQSPDVSRFLNSDSVSADDNDNSVDVDVKVSTETENAENSDQEESSNGPVSSQGSGNGGSGVYEAMNSPSHDSGRYERDISSSHEHATVEEGVKLEGIVKGCDLKRKKESSHESAETRTPKCSRRSSSMEIKTQQQQQQQQAQSQSQSGFDGIEDEDEKRKARLMRNRESAQLSRQRKKHYVEELEEKVRSMHSTIADLSSKITYVMAENATLRQQLSGGVMCPPPPPGAGMYPHPPMAPMPYPWMPCAPYVVKPQGSQVPLVPIPRLKPQQPAASSKSKKSESKKTEVKTKKVASISLLGLFFCIMLFGGLVPMVDFKFGGLVDNVSGRSSYVSDRWFYGHGGGKIWPVNGHMNESGRDGEVGSPNGRFGISDRNTYERGRKLGEEMNERKDSSCFGHRDNASEPLLASLYVPRNDKLVKIDGNLIIHSIMASEKAKASQDAQVKKEKSETGLAIPKDWDSALAIPEVGRNRGQHPNVYRVSAEQRRAIGSGSAKTLKDHMKSSATDGKMQQWFREGIAGPMLSSGMCTEVFQFDVSPAPGAIVPATAVGNISTETRRNATNINKSRNRRILHTLPDPLPGTRLNITEEHARNLPKDHLPGNKSSMVVSVLVDPKEDSDVDGMMAPKPLSRIFVVVLIDSVKYVTYSCGLPRASPLVTAYV 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03029 765 MobiDBLite consensus disorder prediction 69 282 - -
Trre14g03029 765 MobiDBLite consensus disorder prediction 140 170 - -
Trre14g03029 765 FunFam bZIP transcription factor 49 261 323 - -
Trre14g03029 765 MobiDBLite consensus disorder prediction 9 23 - -
Trre14g03029 765 MobiDBLite consensus disorder prediction 255 282 - -
Trre14g03029 765 Gene3D - 260 322 - -
Trre14g03029 765 MobiDBLite consensus disorder prediction 125 139 - -
Trre14g03029 765 Pfam bZIP transcription factor 261 320 IPR004827 GO:0003700|GO:0006355
Trre14g03029 765 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 37 760 - -
Trre14g03029 765 MobiDBLite consensus disorder prediction 174 228 - -
Trre14g03029 765 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 260 320 IPR004827 GO:0003700|GO:0006355
Trre14g03029 765 MobiDBLite consensus disorder prediction 77 124 - -
Trre14g03029 765 MobiDBLite consensus disorder prediction 229 253 - -
Trre14g03029 765 SUPERFAMILY Leucine zipper domain 262 320 IPR046347 GO:0003700|GO:0006355
Trre14g03029 765 SMART brlzneu 258 322 IPR004827 GO:0003700|GO:0006355
Trre14g03029 765 MobiDBLite consensus disorder prediction 365 393 - -
Trre14g03029 765 Coils Coil 285 305 - -
Trre14g03029 765 MobiDBLite consensus disorder prediction 1 23 - -
Trre14g03029 765 CDD bZIP_HY5-like 263 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03029 Trre-Chr14 36881590 36884627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03029 1 763 bZIP Transcription Factor Family AT2G40950 47.222 1.33e-172 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre14g03029 bZIP_1 9.6e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03029 K25783 - gmx:100101871 865.914