Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03019 ATGGAAGGTGATAAGTGTTGTTCAAGTTTTTTTCAAAGATGCAAACCTTACATAGCTATGATTTCTCTACAATTTGGTTTTGCTGGTATGAACATAATCACAAAGGTTTCACTCAACCGAGGAATGAGTCATTATGTTCTTGTTGTTTATAGACATGCTTTTGCTACTGCAGCTATTGCTCCTTTTGCTATAGTTCTTGAGAGGAAGATAAGGCCAAGGATTACATTTCTTATGTTCATGCAAATGTTTGTGTTGGGACTCCTCGGGCCTGTGATTGATCAGAACCTATACTATGCTGGGTTGAAATTCACTTCCCCAACCTACTCATGTGCTATTAGCAATGTTCTCCCTGCAATGACATTTGTAATGGCAGTTATTTTCAGGATGGAGAAATTGGACATTAAAAAATTAAGATGCCAAGTAAAGGTGATTGGAACTATAATTACAGTTGCTGGGGCCATGGTGATGACATTATACAAAGGACAAGTTATTAATATATTGGGATCTCAATACATGCATCATCCTAGAAATTATGTACCTGAAAACACTACTGACTCTGGTGAAAAGGATTGGTTTAAGGGTTCTGTTCTTCTCATAATTGCTACATTTGCTTGGGCTTCTTTCTTCATTCTTCAGGCTGTGACCTTAAGGCAATATTCAGCTCAACTCTCACTTACAGCCATAGTGTGTTTCTTGGGCACACTTCAATCAATTGCTGTTACTTATGTTATGGAGCATAGCCCAAATGTTTGGAACATTGGTTGGGACATGAACCTATTAGCTGCAGCCTATGCTGGTATAATATCATCAGGTCTTACATACTATGTTCAAGGAATAGTGATGCAAAAGAAAGGGCCAGTTTTTGTCACTGCTTTTAGTCCTTTGATGATGATAATTGTGGCAATAATGGGGACTTTCATCCTTGCAGAAAAATTATATCTTGGAGGTATTATTGGAGCAATTTTGATTGTAATAGGACTATATTCAGTTCTATGGGGCAAAAACAAAGAAAACAAAGAGATTGAAGCAGTGACGATAACTGAGGAAATTAAGTGTTGTAGAGAAAATGGAGTGATGGAAACAGTGATTGAAGGTGTTGAAACAAATGACATTGAGATGCAAAATGGTGAAGCTAATAGTAAAGTATTAAGGGTAGCAATTATTAGTGTTCCAAAAGTTTAA 1182 0.368 MEGDKCCSSFFQRCKPYIAMISLQFGFAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFAIVLERKIRPRITFLMFMQMFVLGLLGPVIDQNLYYAGLKFTSPTYSCAISNVLPAMTFVMAVIFRMEKLDIKKLRCQVKVIGTIITVAGAMVMTLYKGQVINILGSQYMHHPRNYVPENTTDSGEKDWFKGSVLLIIATFAWASFFILQAVTLRQYSAQLSLTAIVCFLGTLQSIAVTYVMEHSPNVWNIGWDMNLLAAAYAGIISSGLTYYVQGIVMQKKGPVFVTAFSPLMMIIVAIMGTFILAEKLYLGGIIGAILIVIGLYSVLWGKNKENKEIEAVTITEEIKCCRENGVMETVIEGVETNDIEMQNGEANSKVLRVAIISVPKV 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03019 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 336 - -
Trre14g03019 393 Pfam EamA-like transporter family 17 157 IPR000620 GO:0016020
Trre14g03019 393 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020
Trre14g03019 393 PANTHER WAT1-RELATED PROTEIN 15 342 IPR030184 GO:0016020|GO:0022857
Trre14g03019 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03019 Trre-Chr14 36558908 36561836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03019 1 391 Nodulin-like Gene Family AT5G07050 61.772 8.20e-180 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03019 - - gmx:100793545 654.44