Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02987 ATGACACCACGCACAGACGAATACGAACAAGATAACAGTCACCTCAATGCCACCACCGACGACGACGGTCTCAAACAAGACATGGCTGCACTCGCGCGAGCCTGTATGTTCAACGACGATGAAACTAAAACTCATTCTCAAGAAGATCCTCTTTTGGCCTCCGGCGATGCTATTGTTCCCTTTACTATTCTCTCCGACTCTGACTCCGATGACCTAGAATGTCTCAAGAGAGTTAAGAGTCGTTATCAGTCTACCGACACTCTTCCTTCGACTCAGATGACGCTAGCCGCGTCCCATGATGATGACGAAGATGACTTCGAAACTGTTCGCGCTATTTTTAAACGATTTTCTGCTTATGATGGAAGTGGAAGGGAAGCGTGGGATGAGGGGAATCAGGCCTCGAGTTTAATTGATGAGCAGGATGTTGCCAAGTGCTCCATCTCTGAATACTCAGATGCTGATGAATTGTGTCCTGATTCTCTATCAGCTGATAATGACGCCAAGTTGCTGATTAAGCCAGGTGGTTTTGACGAGACTTGTGAAAATGATGCTAGCTTGTCTTCTCAATTACCTAAGAAAAGATCAAGCTTTCCTCCGTCAGCTCAAGCTTTTATTGTTGCGATCAAGAAGAATAGAGCTCTCCAGAGATTTCTTAGAAGTAAGTTGATTGAAACTGAAGCAAAAATTGAGGAAAACAAAAAGCAAAGGGACAAAGTTAAAATCCTTAAGGATTTCCAGGTTACATTGAGTAGAAGAACGGCGAAGGCTTTTTCATTGAAGATCGATCCACGTGTTCAGTTAATATCATCCAAGAAGTCTGTTGCTTCAAATAAGTCAAAGAGCCAAAATAAAAAAGTATCTGCAATGTGTTATGGCCCAGATGAGAATTCTCATGTTGCTAACTATAAGATGGTATTGGAAAGATTTCCGCTTTCATTGGATCGAAAAAAATGGTCAAATAAAGAAAAGGAAAATCTTTTGAAGGGAATTAAGCAACAATTCCAAGAAACAGTGCTTCAAATTTCAGTAGATAGAATGTGTTCAGGTTACTCACCTGGAGATACAAATGACATGGATATTATAATTGAATCAGTTAAAGATATTGAAATTACATCAGAGAGGATTAGAGAATTTTTACCTAAAGTTAATTGGGATCGATTGGCTTTCTATGTATGTTGCTGGCCGTACTGGTCGTGA 1197 0.4052 MTPRTDEYEQDNSHLNATTDDDGLKQDMAALARACMFNDDETKTHSQEDPLLASGDAIVPFTILSDSDSDDLECLKRVKSRYQSTDTLPSTQMTLAASHDDDEDDFETVRAIFKRFSAYDGSGREAWDEGNQASSLIDEQDVAKCSISEYSDADELCPDSLSADNDAKLLIKPGGFDETCENDASLSSQLPKKRSSFPPSAQAFIVAIKKNRALQRFLRSKLIETEAKIEENKKQRDKVKILKDFQVTLSRRTAKAFSLKIDPRVQLISSKKSVASNKSKSQNKKVSAMCYGPDENSHVANYKMVLERFPLSLDRKKWSNKEKENLLKGIKQQFQETVLQISVDRMCSGYSPGDTNDMDIIIESVKDIEITSERIREFLPKVNWDRLAFYVCCWPYWS 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02987 398 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 17 388 - -
Trre14g02987 398 MobiDBLite consensus disorder prediction 1 21 - -
Trre14g02987 398 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02987 Trre-Chr14 36001040 36003720 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02987 188 387 MYB-Related Transcription Factor Family AT3G18100 45.933 4.57e-54 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02987 K09422 - gmx:100818474 402.134