Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02949 ATGGAAGAACGACAACACGAACAACAACAACGCCAGGTCATCACTCTCGGAACTAATAATCCCCTCCTCCACGGCCCCTTCGCGCCTCGATCGGACGATGAAGACGACGACGCCGGCTGCGCCTATTCCAGAGCGGTCCTCGTGGTTGACATGGTCTGGAACCTCTCCTTCGTGGTCGTTGCCGCCGCCGTTATCCTCTCCACATTCGGCGAGCATCCTTCCACTCCTCTCAGACTTTGGCTCTGTGGCTACGCCTTGGAGTGCGTTCTCCATGTCGCTTTTGTTTACTCTGAATATCGTGTCACTACTCGTGATTCCTTCTCTCACACTCCTTACAGCATTGCAAAGAAGTTAGAGCCTATGAATACTTTAGCATCATCTGTTTGGTGGGTGTTTGGATTTTATTGGATTGTTGTCGGTGGTCAACCACTTCTCGAAGATTCTCCCCGTCTCTACTGGTTGACAGTGGTCTTTCTAGCCTTTGACGTATTTTTTATTATCTTTTGCATCGGGATGGCATGTATAGTTTTCTTCGCTCTCTTCTGCATCATCCCAATAATAGCATTAGCTTATGCTTTAAGAATCAGGGAAGGTGCTTCAGAAGATGATATCAAGTCACTTCCTGTGTATAGGTTTAGTCAGTCAAATGTAATGGTTATGGTTGATGACAACAAGAAGCAACTTGGTAAAGCAAGAACCGGTTCATACAATCAAAGCCATATCAGTGAACTATCTCTTCATCCAGATGATTCTGAATGCTGTATCTGCCTATGTCCATATGTTGATGGAACAGAACTGTATCGGCTTCCCTGTACCCACCATTTTCATTGTGCATGCATCAGCCGGTGGCTTCGGACAAAAGCAACTTGCCCGCTCTGCAAATTTAATATCCGAAGAGGCGATACATTGGTTTGA 915 0.4634 MEERQHEQQQRQVITLGTNNPLLHGPFAPRSDDEDDDAGCAYSRAVLVVDMVWNLSFVVVAAAVILSTFGEHPSTPLRLWLCGYALECVLHVAFVYSEYRVTTRDSFSHTPYSIAKKLEPMNTLASSVWWVFGFYWIVVGGQPLLEDSPRLYWLTVVFLAFDVFFIIFCIGMACIVFFALFCIIPIIALAYALRIREGASEDDIKSLPVYRFSQSNVMVMVDDNKKQLGKARTGSYNQSHISELSLHPDDSECCICLCPYVDGTELYRLPCTHHFHCACISRWLRTKATCPLCKFNIRRGDTLV 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02949 304 SMART ring_2 253 293 IPR001841 -
Trre14g02949 304 SUPERFAMILY RING/U-box 246 298 - -
Trre14g02949 304 Pfam Ring finger domain 252 294 IPR001841 -
Trre14g02949 304 ProSiteProfiles Zinc finger RING-type profile. 253 294 IPR001841 -
Trre14g02949 304 PANTHER TARGET OF ERK KINASE MPK-1 34 298 - -
Trre14g02949 304 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 223 301 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02949 Trre-Chr14 32299926 32303752 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02949 34 301 C3H Transcription Factor Family AT1G68070 44.828 3.81e-84 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02949 - - tpra:123888220 586.645