Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02927 ATGTATCATGCAAAGAAGTTTCCGGAGGCAACGATGATGCCTCATAAATCTCAAGGTGGAGCTGAACAGCTTGCAAATGTTGGGGTTTTGAGTGGATCTGCTGTGAAAAATGTCGCACCTGCACCTTCTGGTGGTAGTGGGAAACAGCGTTTGCGTTGGACGTCTGATCTTCATGATCGTTTTGTGGATGCTATCACACAGCTTGGTGGACCAGATAGAGCAACACCGAAAGGTGTTCTGAGAGTGATGGGCGTACCTGGACTGACCATTTATCATGTTAAAAGCCATTTACAGAAGTATCGCCTGGCGAAGTACTTGCCTGAATCACCAGCTGATGGTAAAGATTCTAAAGATGAGAAAAGGAATTCTGGAGACAGTATTTCTGGCGCTGATTCTTCCCCGGGATTGCAAATCAATGACGCACTAAGAATGCAGATGGAGGTTCAGAAACGTCTGCATGAACAGCTTGAGGTTCAAAAGCAATTACAAATGAGAATTGAAGCTCAGGGTAAATACTTGCAGAAGATCATAGAGGAACAGCAGAAATTAGGTAGTACCTTGGCAGCCTCAGAAACGCTTCCATTGCCCCATGATAAGCACAATCATACCCAGTCAGAGCCTTTTGGGTCTAGTGATGCCCTTGCAGGCACTTTTTCTCCACATAAGAAACAGAGAATTGATGAAGGTCCGAAGGATGGCTTCACTGCGTCCCAAGTTACAATAAAGAGTGCAGAGAAGAATGATTGTAATGTTGGTCGTTTAGATCCAAACTTGTATGAAGACGATGCTGGCTTTGGATTTGATTTAGAGACAGAAAACGATGACAACAATGACAGTGAGTAG 843 0.4425 MYHAKKFPEATMMPHKSQGGAEQLANVGVLSGSAVKNVAPAPSGGSGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPADGKDSKDEKRNSGDSISGADSSPGLQINDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQKIIEEQQKLGSTLAASETLPLPHDKHNHTQSEPFGSSDALAGTFSPHKKQRIDEGPKDGFTASQVTIKSAEKNDCNVGRLDPNLYEDDAGFGFDLETENDDNNDSE 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02927 280 Pfam Myb-like DNA-binding domain 51 101 IPR001005 -
Trre14g02927 280 MobiDBLite consensus disorder prediction 107 137 - -
Trre14g02927 280 Coils Coil 139 159 - -
Trre14g02927 280 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 45 105 IPR017930 -
Trre14g02927 280 MobiDBLite consensus disorder prediction 200 280 - -
Trre14g02927 280 NCBIfam myb-like DNA-binding domain, SHAQKYF class 48 103 IPR006447 GO:0003677
Trre14g02927 280 MobiDBLite consensus disorder prediction 108 125 - -
Trre14g02927 280 Pfam MYB-CC type transfactor, LHEQLE motif 136 182 IPR025756 -
Trre14g02927 280 Gene3D - 47 106 - -
Trre14g02927 280 MobiDBLite consensus disorder prediction 265 280 - -
Trre14g02927 280 FunFam Myb family transcription factor 47 105 - -
Trre14g02927 280 SUPERFAMILY Homeodomain-like 47 102 IPR009057 -
Trre14g02927 280 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 47 223 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02927 Trre-Chr14 31482132 31485653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02927 34 198 G2-like Transcription Factor Family AT3G13040 52.047 2.27e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Trre14g02927 Myb_DNA-binding 2.7e-06 CL0123