Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre14g02865 | ATGAGTTCACAAACCTTCAACAATGGCGACATGGCTCTTTTCCCATTATCTCCTATTCCTTCTTCTTTGACAAATCCTGAAATGGGTCTTCAGATTTTGAGACCTTCTTTGTTTCAGTCCAAAGAGATGATCATGAGAGAAACAAAGGAAGAAGATGCGTACTTTGGGATTCAGAGCAAAAACTTGTCTTTGAAACTTGGTGATGAAGTAGAAGAAGAAAAAAGCTCTGTTCCTGTGAAGATTGGTTACTCCAAACTTTGTTCTAGAGGTCATTGGAGACCAGCTGAAGATTCAAAACTTAAGGAACTTGTTGCTGAATTTGGTCCTCAAAATTGGAACTTGATTGCAGAACATCTTGATGGAAGATCAGGAAAAAGTTGCAGATTAAGGTGGTTTAATCAGCTAGACCCAAGGATTAACAAAAGAACATTTTCAGAGGAGGAAGAGGAGAGACTTTTAGCTGCTCATAAAATGTATGGTAACAAATGGGCTATGATTGCTAGACTTTTTCCAGGAAGAACAGATAATGCAGTGAAGAATCATTGGCATGTAATCATGGCTAGGAGACATAGGGAACAGTGTAGTGTGTATAGAAGGAGAAAGCCAATTGTTGAAAGCATTTCAAAGGGTTTGAAATTGAGTCTTTCAAATAATGCAGCTAGTGATTCAACTATCTCAAGCAACATTGATGGAAATGCATCAGCTTGTACTAATCTCTCCCTCACTCCTTCTTCAGTTAATCTAAATCCTCAACTGTTTCATAAATTTGTGGCTCCAGTTCAGAATTACCAAGATTTTGGATCACTAATTATGGGTAAGTCTAGAGAAAGTGTGGTTGCAACTAGGGATGTGAGTTTTGACAAATATTTTGGAGCTAGTAAGAAGCAAGAACAAGTGGAAAAGCTAAAGGTAATAGATGTGGTCCAGTCCAATTTTTCAGATTCAAACTCAGAAGTATCAGCATCTGAGTCAGTTACAACCAATAGGTCCAATATCTCAATTTCTGGTGAAAGTGAAAATGTTGGTATTAAGATTAACATGTTACCATTCATTGATTTTCTTGGAGTAGGAGCTACACATAGCTAA | 1086 | 0.3738 | MSSQTFNNGDMALFPLSPIPSSLTNPEMGLQILRPSLFQSKEMIMRETKEEDAYFGIQSKNLSLKLGDEVEEEKSSVPVKIGYSKLCSRGHWRPAEDSKLKELVAEFGPQNWNLIAEHLDGRSGKSCRLRWFNQLDPRINKRTFSEEEEERLLAAHKMYGNKWAMIARLFPGRTDNAVKNHWHVIMARRHREQCSVYRRRKPIVESISKGLKLSLSNNAASDSTISSNIDGNASACTNLSLTPSSVNLNPQLFHKFVAPVQNYQDFGSLIMGKSRESVVATRDVSFDKYFGASKKQEQVEKLKVIDVVQSNFSDSNSEVSASESVTTNRSNISISGESENVGIKINMLPFIDFLGVGATHS | 361 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre14g02865 | 361 | Gene3D | - | 142 | 201 | - | - | |
Trre14g02865 | 361 | ProSiteProfiles | Myb-like domain profile. | 136 | 186 | IPR001005 | - | |
Trre14g02865 | 361 | FunFam | MYB transcription factor | 89 | 140 | - | - | |
Trre14g02865 | 361 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 136 | 190 | IPR017930 | - | |
Trre14g02865 | 361 | PANTHER | MYB PROTEIN-RELATED | 89 | 292 | - | - | |
Trre14g02865 | 361 | SUPERFAMILY | Homeodomain-like | 89 | 182 | IPR009057 | - | |
Trre14g02865 | 361 | CDD | SANT | 92 | 133 | IPR001005 | - | |
Trre14g02865 | 361 | Gene3D | - | 89 | 140 | - | - | |
Trre14g02865 | 361 | CDD | SANT | 152 | 183 | IPR001005 | - | |
Trre14g02865 | 361 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 89 | 135 | IPR017930 | - | |
Trre14g02865 | 361 | ProSiteProfiles | Myb-like domain profile. | 89 | 135 | IPR001005 | - | |
Trre14g02865 | 361 | Pfam | Myb-like DNA-binding domain | 89 | 135 | IPR001005 | - | |
Trre14g02865 | 361 | Pfam | Myb-like DNA-binding domain | 142 | 184 | IPR001005 | - | |
Trre14g02865 | 361 | FunFam | MYB transcription factor | 142 | 211 | - | - | |
Trre14g02865 | 361 | SMART | sant | 140 | 188 | IPR001005 | - | |
Trre14g02865 | 361 | SMART | sant | 88 | 137 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre14g02865 | Trre-Chr14 | 30298018 | 30299754 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre14g02865 | 84 | 253 | MYB Transcription Factor Family | AT5G17800 | 59.887 | 2.02e-71 | 224 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Trre14g02865 | Myb_DNA-bind_6 | 5.9e-15 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre14g02865 | K09422 | - | gmx:100791795 | 388.652 |