Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02858 ATGGAAGATAAGATGCAACAACATGACCCCCCCAACAACACTCCAACCCAACATGGTTCCGAGAAAACTGAACCGGTTAGGTCAAGATGGACACCAAAACCAGAACAAATTCTCATACTTGAGTCCATCTTCAATAGTGGTATGGTGAATCCACCAAAAGAAGAAACCATCAAAATAAGAAAACTTCTTGAAAAATTTGGCAACGTCGGCGACGCTAACGTCTTTTACTGGTTTCAAAACCGTCGGTCTAGATCTCGTCGCCGACAACGCCAGATGCAACAGGCAACACTTGATCAACAAAAAAATCAGATGCTGATGATGCAACAACCTCAACAAGTTGTTAATGATGTTGGTGCAACTCCAAGTGCAATTTCATGTGATATGGTTCAAACTTATCCAATAATGGGTGGTTTTGGTGGTTCTTCCTCTTGTTTGAATGATTCTTCTGGTTCTTCTTCTTCATCATGTGGTGGTTTTCTTAGTGGTCAACAAGGCATGGATGGTTTCTTTTCAGTTTCTTCTCAAATGGGTTTCCTTGGAATTGATCAAACTATGGCTCCATCTTCACTTTTGTGCCCTCCTTTTTCTTCAAATTTGAACTATCACTCTGGATATGGAGGTGGTGCTACAGGATTGATAACAGTGTTTATCAATGGGATAGCAACAGAAATTGAGGCAGGGCCAATAGACATCAAAACAGTGTTTGGAGATGATGTGATGTTAGTTCATTCTTCTGGTTTGCCAGTTCCCACAAATGAACATGGCATCTTGATTCACTGCTTGCACCATGGTGAAAGCTACTTTCTGGTACTTGCCAAATACTATCATCCATCTTCAAATCAATTCTAG 849 0.4075 MEDKMQQHDPPNNTPTQHGSEKTEPVRSRWTPKPEQILILESIFNSGMVNPPKEETIKIRKLLEKFGNVGDANVFYWFQNRRSRSRRRQRQMQQATLDQQKNQMLMMQQPQQVVNDVGATPSAISCDMVQTYPIMGGFGGSSSCLNDSSGSSSSSCGGFLSGQQGMDGFFSVSSQMGFLGIDQTMAPSSLLCPPFSSNLNYHSGYGGGATGLITVFINGIATEIEAGPIDIKTVFGDDVMLVHSSGLPVPTNEHGILIHCLHHGESYFLVLAKYYHPSSNQF 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02858 282 ProSiteProfiles 'Homeobox' domain profile. 23 88 IPR001356 GO:0003677
Trre14g02858 282 MobiDBLite consensus disorder prediction 1 31 - -
Trre14g02858 282 Gene3D - 25 96 - -
Trre14g02858 282 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 271 IPR044558 GO:0003700|GO:0048830
Trre14g02858 282 Pfam Homeodomain 27 87 IPR001356 GO:0003677
Trre14g02858 282 FunFam WUSCHEL-related homeobox 11 27 94 - -
Trre14g02858 282 SUPERFAMILY Homeodomain-like 20 94 IPR009057 -
Trre14g02858 282 SMART HOX_1 25 92 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02858 Trre-Chr14 30229995 30232734 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02858 5 271 Wox Gene Family AT3G03660 50.000 6.73e-63 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Trre14g02858 Homeodomain 9.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02858 - - gmx:100818735 274.633