Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02820 ATGGCTTCTGTGTTTCTTGTGTTGGTTACTTTGTTACTTTCTATAAACCATTCAGAGCAACTTCAATCCTCACACTCTCAAACCCTTTTAAGAATTCAACAGCTATTGAATTTTCCTTCTGCTTTAAGGAATTGGAATAATTCCACAGATTTTTGTAACACAGATTCAAACTCTTCACTCACTGTAGTATGCTATGAAGATACAATAACTCAACTTCATATAATAGGTGATGGAAAAACTCAACCATTGCCGAAAAATTTCTCTATTGATTCATTTGTCACAACACTAGTAAAGCTTCCAAGTTTGAAGGTTCTTACATTGGTTTCTCTTGGTATTTGGGGTCCATTACCTGGTAAAATTTCTCGGTTATCGTCGTTGGAAATAGTTAATATGAGTTCGAATCATCTCTACGGTTCGATCCCTATGGAACTTTCGTCGCTCTCGAATCTTCAGACACTCATTCTTGACAATAACATGTTTTCTGGTCAACTTCCTATTTGGATTGATTTGCTTTCAGAGTTAACTGTGTTGAGTTTGAAAAACAATTTGTTTAATGGATCGTTACCTAATTCGGTTAGTAATTTGGAGAATTTGAGGATTCTTTCACTTTCTCATAATAAGTTATATGGATTAGTACCTGATTTGAGTCATTTGAGAAATCTTCAAATACTTGAATTAGATAGTAATGCTTTTGGACCTCAATTTCCTAAGCTTGGTAACAAGTTGGTTACTATTGTGCTAAGAGATAACAAATTCAGGTCTGGTATTCCTGCTGAAGTGAGCTCATATTATCAGCTCGAGCGATTCGATATTTCATCGAATACTTTCGTAGGGCCATTCCAGGCAGCATTGTTGTCACTTCCTTCTATTGCTTACCTCAACATTTCTAGGAACAAATTAACCGGAATGCTTTTTGAGAATGTTTCTTGCAATTCTGAGATTGCAGTTGTTGATTTATCGTCAAATCTTTTAACTGGGAGCTTACCGAAATGTTTAGTTTCAAATTCTAGTGATAGGACTGTTTCGTATGCTAGAAATTGTCTCGAGACGACGAATCAAAATCAGCATCCGTCACCTTTTTGTCACACTGAAGCCTTAGCAGTTGGAATATTACCCGAAACAAAGAAGAAAAAACAAGTATCAAAGGTAGTTCTTACCCTTGGTATAGTAGGTGGAATTCTTGGAGGAGTAGCACTTGCTTTTCTGATTTTATTTATTGTTAGAAGAGGGAATGCTAGAAACAAAATGAAGAATCCTCCAACAAGAATAATATCAGAGAATGCAGCTTCTGGATACACCTCTAAGTTGCTTTCTGATGCAAGATATATATCTCAAACAAAGAAGTTTGGAGCCCTTGGCCTACCAAACTATAGGAGTTTTTCATTGGAAGAGATTGAGGAGGCTACAAACAACTTTGACACGGCTTCTTTAATCGGTGAAGATTCTTATGGAGAGATGTACAGAGGTCAGCTGAAGAATGGTTCGTTTGTTGTTATTAGATGTATCAAAATGAAAAAACGATACAGCACTCAAAACTTTATGCAGAACATGGAGCTTATATCAAAACTTAGGCATCGTCATTTAGTAAGCGCTATTGGACACTGCTTCGAATGTTCTTTAGAAGATTCAAGTGTCAGCAAAATATTTCTCGTCTTTGAATATGTACCTAATGGCACACTCAGGAGCTGGACGTCTGATGGGCACAGTGGGAAATCTCTAAATTGGACGCAACGCATAGGAGCTGCAATTGGAGTAGCAAAAGGAATTCAGTTTTTGCATACAGGAATTGTCCCTGGTGTATATTCAAACAATATCAAAATAGAAGATATTTTATTAGATCGAAATTTTGTTGCAAAAATTAGCAGTTATAACCTGCCTCTGTTATCTAACATAGGAAAGGTTCGGCGTGGAAATTCATCTAATGAATCCAAACATTCTAGTATCAATAAAAGTGGAAATCATGAAGATAAGTGTGATATATATGACTTTGGAGTAATACTACTTGAAATCATTCTAGGAAGGACAATTAAGACAACAAATGATGCAGAAGCTTTTAAGGATCTGTTGCAAGCAAGCTTAGGAGCTGATGAGGATTCTAGGAGGAGCATTGTTGATCCAGCGATTCGCAAGGCATGTTTGAGTCAATCATTGAAGACAATGATGGAGATATGTGTGAAGTGCCTGTTTAAAGATCCAGCAGAAAGGCCCTCCACAGAGGATGTTCTGTGGAATTTGCAATTTGCTGCACAAGTACAGGATGCTTGGAGAGGGGATTCTCAAAGTAGTGAAGGGTCACCAGGTTCTCCTTTACAGGCTCGAAGACAGGCCTTCCATTAG 2337 0.3727 MASVFLVLVTLLLSINHSEQLQSSHSQTLLRIQQLLNFPSALRNWNNSTDFCNTDSNSSLTVVCYEDTITQLHIIGDGKTQPLPKNFSIDSFVTTLVKLPSLKVLTLVSLGIWGPLPGKISRLSSLEIVNMSSNHLYGSIPMELSSLSNLQTLILDNNMFSGQLPIWIDLLSELTVLSLKNNLFNGSLPNSVSNLENLRILSLSHNKLYGLVPDLSHLRNLQILELDSNAFGPQFPKLGNKLVTIVLRDNKFRSGIPAEVSSYYQLERFDISSNTFVGPFQAALLSLPSIAYLNISRNKLTGMLFENVSCNSEIAVVDLSSNLLTGSLPKCLVSNSSDRTVSYARNCLETTNQNQHPSPFCHTEALAVGILPETKKKKQVSKVVLTLGIVGGILGGVALAFLILFIVRRGNARNKMKNPPTRIISENAASGYTSKLLSDARYISQTKKFGALGLPNYRSFSLEEIEEATNNFDTASLIGEDSYGEMYRGQLKNGSFVVIRCIKMKKRYSTQNFMQNMELISKLRHRHLVSAIGHCFECSLEDSSVSKIFLVFEYVPNGTLRSWTSDGHSGKSLNWTQRIGAAIGVAKGIQFLHTGIVPGVYSNNIKIEDILLDRNFVAKISSYNLPLLSNIGKVRRGNSSNESKHSSINKSGNHEDKCDIYDFGVILLEIILGRTIKTTNDAEAFKDLLQASLGADEDSRRSIVDPAIRKACLSQSLKTMMEICVKCLFKDPAERPSTEDVLWNLQFAAQVQDAWRGDSQSSEGSPGSPLQARRQAFH 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02820 778 SUPERFAMILY Protein kinase-like (PK-like) 454 747 IPR011009 -
Trre14g02820 778 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 22 239 - -
Trre14g02820 778 ProSiteProfiles Leucine-rich repeat profile. 197 219 IPR001611 GO:0005515
Trre14g02820 778 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 555 761 - -
Trre14g02820 778 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase isoform A 240 357 - -
Trre14g02820 778 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 445 554 - -
Trre14g02820 778 Gene3D Transferase(Phosphotransferase) domain 1 555 762 - -
Trre14g02820 778 Gene3D Phosphorylase Kinase; domain 1 443 554 - -
Trre14g02820 778 SUPERFAMILY L domain-like 32 349 - -
Trre14g02820 778 Gene3D Ribonuclease Inhibitor 22 241 IPR032675 -
Trre14g02820 778 MobiDBLite consensus disorder prediction 756 778 - -
Trre14g02820 778 Pfam Protein tyrosine and serine/threonine kinase 476 742 IPR001245 GO:0004672|GO:0006468
Trre14g02820 778 ProSiteProfiles Protein kinase domain profile. 472 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g02820 778 Gene3D Ribonuclease Inhibitor 242 360 IPR032675 -
Trre14g02820 778 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 71 745 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02820 Trre-Chr14 29508687 29512263 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02820 38 766 Miscellaneous Gene Families AT3G03770 62.943 0.0 901
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Trre14g02820 PK_Tyr_Ser-Thr 4.9e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02820 - - gmx:100807539 1231.85