Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02774 ATGTCAATTTCTCTTGCAGCGATAATAGGAGGAGCTGCAGGAGCCGTGGCATTGGTAGGGATATCTATACTACTTTTATGGTTTTGTTTGTTTCGCCAAACAAGTGTTTCTAGGACTTCAGAGACAGGGTCGTCTGATCCTTCACAAGTTGGAAGACATGGTGGAATGGAGTCGCAAATGCGAGATACTAGACGTTTTGCGTTGGAAGAACTTTCACATGCAACAAAGAATTTCAGTGACAAAAATTTGATTGGAGAAGGAAAATTTGGTGAGGTTTACAAAGGTTTACTTCAAGATGGGATGCTTGTAGCCATCAAGAAGCGCCGTGCTGCCACAAGCCAGGAATTTGTTGACGAGGTGCGTTATCTTTCAGCTATTCAACATCGGAATCTCGTAACTCTTATCGGATACTGCCAAGAAAACAATCTACAGTTTCTTATATATGAATATGTGCCTAATGGAAGCGTCTCCATTCACTTGTATGGCGCTACTAGTCAACAACCGCGGGAGAAGCTAGAATTCAAGCATAGACTCTCAATAGCTCAAGGTGCTGCTAAAGGTTTGGCTCATCTTCACTCTTTGAGTCCCCGTTTGGTGCATAAGAATTTCAAAACATCTAATGTTCTTGTCGATGAAAACTTCATTTCTAAGGTCGCGGATGCAGGGCTTCGTAATTTTTTAGGGAGAGTTGACATTGCAGGCTCATCTTCTCAAGTGGCGTCAGATGAGATATTCCTTGCACCTGAGGTGAGAGAGTTCAGACAATTTTCTGAGAAGAGCGATGTGTATAGCTTTGGGGTATTTTTGCTAGAATTGTTGAGTGGGAAGGAAGCAACAGAATCACCCTCTATAAACACAAGTCAAAATCTGGTCGAATCGGTGCTAAGTAATCAAGACAGTAGCATTATGTCTACAATCATTGATCAAAGAATGGAGAGTAGATTTACAGCTGAAGGCATGGAAAATTACATCCTACTCTTAATAAGATGTTTGGATCCTTCAAGTGAAAGAAGACCTGCAATGGGCTATGTTGAAATGGAACTCGATCGAATCCTCGAAAAAGAGATGAACTTGACAACAATGATGGGTGAAGGAACACCAACTGTGACTCTTGGAAGTCAATTATTCAAATCAACTAAATAA 1143 0.4112 MSISLAAIIGGAAGAVALVGISILLLWFCLFRQTSVSRTSETGSSDPSQVGRHGGMESQMRDTRRFALEELSHATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRRAATSQEFVDEVRYLSAIQHRNLVTLIGYCQENNLQFLIYEYVPNGSVSIHLYGATSQQPREKLEFKHRLSIAQGAAKGLAHLHSLSPRLVHKNFKTSNVLVDENFISKVADAGLRNFLGRVDIAGSSSQVASDEIFLAPEVREFRQFSEKSDVYSFGVFLLELLSGKEATESPSINTSQNLVESVLSNQDSSIMSTIIDQRMESRFTAEGMENYILLLIRCLDPSSERRPAMGYVEMELDRILEKEMNLTTMMGEGTPTVTLGSQLFKSTK 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02774 380 Pfam Protein tyrosine and serine/threonine kinase 82 345 IPR001245 GO:0004672|GO:0006468
Trre14g02774 380 MobiDBLite consensus disorder prediction 38 52 - -
Trre14g02774 380 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Trre14g02774 380 ProSiteProfiles Protein kinase domain profile. 78 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g02774 380 Gene3D Transferase(Phosphotransferase) domain 1 151 366 - -
Trre14g02774 380 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 14 357 IPR047117 -
Trre14g02774 380 Gene3D Phosphorylase Kinase; domain 1 50 150 - -
Trre14g02774 380 FunFam Protein kinase superfamily protein 151 365 - -
Trre14g02774 380 FunFam Protein kinase superfamily protein 43 150 - -
Trre14g02774 380 MobiDBLite consensus disorder prediction 38 58 - -
Trre14g02774 380 SUPERFAMILY Protein kinase-like (PK-like) 58 345 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02774 Trre-Chr14 28787643 28789805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02774 64 353 Receptor kinase-like Gene Family AT1G30570 40.678 9.77e-62 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Trre14g02774 PK_Tyr_Ser-Thr 4.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02774 - - tpra:123888647 694.115