Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02766 ATGAGTCCTTTGAAAGGAAAGAAGAAACAAACAACCGGAACAACCAGCGAAACAACGACACAAGAACAACAAACGGCATGGGGAGGAAGATACCTCGGAGTAAGAAGAAGACCGTGGGGAAGATACGCGGCGGAGATTCGAGATCCTTCTACGAAAGAAAGACACTGGTTAGGAACATTCGACACTGCTGAAGAAGCTGCTTTAGCTTACGATAGAGCCGCACGTGGCATGCGTGGATCACGTGCCAGAACCAATTTTGTTTACTCCGATACACCTCCTGGTTCTTCCGTTACTCCTATTCTCTCACCCGACCAACAACAACAACAACAACAACAACCTCAAACTTTTCATGACCTTTCGTTTGTTCTTCAACCCGACCTAGTTCCTTGTCTTGACCCGGTTTCAATCATAACTTCCTCCGGTAATTACGGTTACGGTTACAATGAGGAAAATAATAATTATTTCAATAAATATAATCTTTCTCCTCATTCTCCTCAAGTTCCTCTTCCCACATTGGAGGCTAGTATTAATAATACTGGAAATTCCTATTTTAACCTTAACAGCAGCAGCAGTGTAGAGCTTCCTCCTTTGCCACCGGATATTACAAGCTCCACGTGTTATGATCAGGGTAACTATGGATTCAACGGTGGTGATCATAATCATGATCATGATCATGGGTATTATTATTCTTCATCATGGGATCAGAATGTGGATTGTTATAATATGGGAGGTGCAGAGAATAATAATACTACATTGGCAGGTTCTGTTAATGGTACTAGTAGTACTTTTGATTTCGGAAGTTCGTCCTTTTTCTTCTGA 819 0.4176 MSPLKGKKKQTTGTTSETTTQEQQTAWGGRYLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARGMRGSRARTNFVYSDTPPGSSVTPILSPDQQQQQQQQPQTFHDLSFVLQPDLVPCLDPVSIITSSGNYGYGYNEENNNYFNKYNLSPHSPQVPLPTLEASINNTGNSYFNLNSSSSVELPPLPPDITSSTCYDQGNYGFNGGDHNHDHDHGYYYSSSWDQNVDCYNMGGAENNNTTLAGSVNGTSSTFDFGSSSFFF 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02766 272 ProSiteProfiles AP2/ERF domain profile. 30 87 IPR001471 GO:0003700|GO:0006355
Trre14g02766 272 Pfam AP2 domain 31 79 IPR001471 GO:0003700|GO:0006355
Trre14g02766 272 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 18 152 - -
Trre14g02766 272 SMART rav1_2 30 93 IPR001471 GO:0003700|GO:0006355
Trre14g02766 272 MobiDBLite consensus disorder prediction 1 27 - -
Trre14g02766 272 FunFam Ethylene-responsive transcription factor 2 30 88 - -
Trre14g02766 272 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700|GO:0006355
Trre14g02766 272 PRINTS Ethylene responsive element binding protein signature 53 69 IPR001471 GO:0003700|GO:0006355
Trre14g02766 272 CDD AP2 30 86 IPR001471 GO:0003700|GO:0006355
Trre14g02766 272 MobiDBLite consensus disorder prediction 84 114 - -
Trre14g02766 272 SUPERFAMILY DNA-binding domain 30 88 IPR016177 GO:0003677
Trre14g02766 272 Gene3D AP2/ERF domain 29 88 IPR036955 GO:0003700|GO:0006355
Trre14g02766 272 MobiDBLite consensus disorder prediction 83 114 - -
Trre14g02766 272 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02766 Trre-Chr14 28521689 28522507 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02766 14 230 AP2-EREBP Transcription Factor Family AT5G13910 47.005 5.52e-50 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Trre14g02766 AP2 1.1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02766 K09286 - gmx:100809600 176.022