Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02731 ATGAAGCAAGGGTTGATAAAAGGACCATGGTCAAAACAAGAGGATGAAATATTAAAAGAATATGTAAAAACATATGGATCAAAAAATTGGAATAGAGTACAAAGGTTAACTGGACTTCCTCGAAATGGCAAAAGTTGTCGTCTAAGATGGCTTAATCATCTTGATCCATATTTGAAAAAGGGAAAACTTAGTGAAGAAGAAAAACAACAAATCCTTCAACTTTGTCAACATAACAAAAAATGGTGTGAAATTGTTAAACAGTTTCCGGGAAGAACTGATAATGGGATAAAGAACTTCTTTAATATTAACGAGAGAAAGAAACGTAAAATGGAGAATGGCAATGGAGAATGTCGGAAAAAGAAAAAGAAAATAAGTTATTTGCCACTCAACGATGAAATCGTGAAACCACATGATAATGAGTTGAATGATGTAACACCCCGTTTTTCAAAAGCCAAAAAGGGCATTATTTTTTTTTTCTTTTTCAACTAA 489 0.3211 MKQGLIKGPWSKQEDEILKEYVKTYGSKNWNRVQRLTGLPRNGKSCRLRWLNHLDPYLKKGKLSEEEKQQILQLCQHNKKWCEIVKQFPGRTDNGIKNFFNINERKKRKMENGNGECRKKKKKISYLPLNDEIVKPHDNELNDVTPRFSKAKKGIIFFFFFN 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02731 162 Gene3D - 59 109 - -
Trre14g02731 162 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 108 IPR017930 -
Trre14g02731 162 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 58 IPR017930 -
Trre14g02731 162 SMART sant 6 56 IPR001005 -
Trre14g02731 162 SMART sant 59 106 IPR001005 -
Trre14g02731 162 ProSiteProfiles Myb-like domain profile. 55 101 IPR001005 -
Trre14g02731 162 ProSiteProfiles Myb-like domain profile. 2 54 IPR001005 -
Trre14g02731 162 FunFam Transcriptional activator Myb isoform A 6 59 - -
Trre14g02731 162 CDD SANT 64 101 IPR001005 -
Trre14g02731 162 Gene3D - 6 58 - -
Trre14g02731 162 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 4 109 - -
Trre14g02731 162 Pfam Myb-like DNA-binding domain 10 70 - -
Trre14g02731 162 SUPERFAMILY Homeodomain-like 4 100 IPR009057 -
Trre14g02731 162 CDD SANT 9 54 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02731 Trre-Chr14 28084909 28086585 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02731 5 113 MYB Transcription Factor Family AT3G11440 52.727 3.88e-33 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Trre14g02731 Myb_DNA-bind_6 1.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02731 K09422 - tpra:123888557 197.593