Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02678 ATGACTCCAAGCGATGGAGGCTTTCAGGACAGATACATTGTATCCATTGATACTAAAGGGAAGAAAGGATTTAAAGAGTATTATTTTGCTTTGGTCGCTCCAATTATACTATGCTATATGGGATCTGGTTATCTATGTGGTAGATTGTTGAAGTCTTACAGTTCATTGCCAATCAAGAAAGAAGGGCTGCAACTTCCTTCTAGTTTTGCTGCTCGTATAGCTGAGAAATCAAATCGGAATTTGAGACTTGCCGTGTCCAACAAAAAAGTTATAATAATTAAGAATCCTGGAATTGCTGATGGACTTTTCAGAATGCATTTTCATGATTGCTTTATAAGAGGGTGTGATGCATCGGTACTTCTTGATTCTGCTCCCTCAAACACTGCAGAGAAAGACTCTCCCGCCAATAAAAGTCTTAGAGGGTTTGAAGTTATTGATAATGCCAAGGCTAAACTTGAAGATGTATGCAAAGGAACTGTTTCATGTGCTGACATAGTTGCATTTGCAGCAAGGGACAATGTGGAGTTTGATTCTACATCATTTGATCTTGCCATTGAAGTTCTTGTTGAACTTGTGACTAAACACGAGATCTTGAAGGCATGTTAA 606 0.3845 MTPSDGGFQDRYIVSIDTKGKKGFKEYYFALVAPIILCYMGSGYLCGRLLKSYSSLPIKKEGLQLPSSFAARIAEKSNRNLRLAVSNKKVIIIKNPGIADGLFRMHFHDCFIRGCDASVLLDSAPSNTAEKDSPANKSLRGFEVIDNAKAKLEDVCKGTVSCADIVAFAARDNVEFDSTSFDLAIEVLVELVTKHEILKAC 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02678 201 PANTHER PEROXIDASE 25-RELATED 92 177 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre14g02678 201 Pfam Peroxidase 93 176 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre14g02678 201 Gene3D - 77 193 - -
Trre14g02678 201 ProSiteProfiles Plant heme peroxidase family profile. 64 174 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre14g02678 201 PRINTS Haem peroxidase superfamily signature 99 113 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre14g02678 201 PRINTS Haem peroxidase superfamily signature 160 177 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre14g02678 201 PRINTS Plant peroxidase signature 101 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre14g02678 201 PRINTS Plant peroxidase signature 140 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre14g02678 201 PRINTS Plant peroxidase signature 159 169 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre14g02678 201 SUPERFAMILY Heme-dependent peroxidases 86 175 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02678 Trre-Chr14 26930913 26933211 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02678 49 174 Peroxidase AT4G33420 51.145 1.00e-33 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02678 K00430 - mnt:21386166 146.747