Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02662 ATGGAAACCGCTAGCCAAGAAACTCTACTTCTTCCTCTTCTTCAAGACATGAAGGTGACAATCCACAAAACATCAATGGTTATTCCATCAAAACAAACCGAGAAAAAATCCTTGTTCTTATCAAACATAGACAAGGTTCTTAATTTCGACGTGAAAACAGTTCATTTCTTTGAAGCAAACCAAGATTTTTCTCCTCAAATAGTGACTGAGAAGTTAAAAGAAGCTCTAGAAGATGTTCTAGTGGATTATGAATTTCTTGCTGGAAGAATAAAGATGAACTCTGAAACCAATAGGTTGGAGATAGATTGCAATGCAGAAGGTGTTGGCTTTGTCGTGGCATCTAGTGAGTATAAATTGGATCAACTTGGGAACTTAGCTTATCCTAATCAAGCTTTTGTACAATTTGTTCACAAGACTAAAGATTTCCTTAAGATAGGTGATATACCACTATGTGTTGTCCAGCTAACATCCTTCAAGTGTGGTGGTTTCTCAATTGGCATCACAACCGGCCATGCAACCTTTGATGGGCTTAATTAG 537 0.3743 METASQETLLLPLLQDMKVTIHKTSMVIPSKQTEKKSLFLSNIDKVLNFDVKTVHFFEANQDFSPQIVTEKLKEALEDVLVDYEFLAGRIKMNSETNRLEIDCNAEGVGFVVASSEYKLDQLGNLAYPNQAFVQFVHKTKDFLKIGDIPLCVVQLTSFKCGGFSIGITTGHATFDGLN 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02662 178 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 25 177 - -
Trre14g02662 178 Gene3D - 13 178 IPR023213 -
Trre14g02662 178 Pfam Transferase family 17 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02662 Trre-Chr14 26780874 26784382 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02662 17 178 Monolignol Biosynthesis Gene Families AT5G48930 37.349 1.30e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02662 K13065 - gmx:100305576 254.218