Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02651 ATGATCAGTGCAATAAAAGCAGCAATTGGAGATGGAGTATTAACTTTCATGTGGGTTTTTTGTTCATCCTTGTTGGGTATAGTTTCTAGTGCTATAACAAAATCTCTTGATCTTCAAAACGTTTCATATAATGGTTTCCCTTACCCTTCTTTAATAATTACCACTACTCTTGTTTTTCTTCTTGTTTTCTTGTTTACCATCATTGGTAATTCAATGGGTGGTGCTAGTTTTAATCCCACTGGTACTGTTGCCTTTTACTTCCTTGGTCATGGTTCTGATACACTCATCTCATTGGCTCTCCGTTTCCCTGCTCAGGCGTTTGGTGCTGCGGGTGGTGCAATGGCAATTGCCGAGTTGATCAATCCGAAATACAGGCACATGATCGGGGGTCCTTCTTTGAAAGTGGACTTGCATACTGGGGCTGCTGCTGAATTGGTTTTGACATTTGTGATTACCTTTGCTGTTCTCTGCATATTCCTCAAGGGCCCTCGTAGTGATTTATTGAAGATTTGGTTGCTCGCCATGTCAACTGTCACTTTGGTAGTGCTTGGCTCTGCTTACACTGGTCCATCCATGAACCCAGCCAATGCCTTTGGTTGGGCATACTTAAACAACTGGCACAACACATGGGACCAATTCTACGTATACTGGATTTGTCCCTTCACCGGAGCAATATTGGCTGCTTGGATATTTCGTGCTATCTTCCCTCCACCAGTTAAACAGAAAAAAAGCATCAAGAAACAAGAATGA 750 0.424 MISAIKAAIGDGVLTFMWVFCSSLLGIVSSAITKSLDLQNVSYNGFPYPSLIITTTLVFLLVFLFTIIGNSMGGASFNPTGTVAFYFLGHGSDTLISLALRFPAQAFGAAGGAMAIAELINPKYRHMIGGPSLKVDLHTGAAAELVLTFVITFAVLCIFLKGPRSDLLKIWLLAMSTVTLVVLGSAYTGPSMNPANAFGWAYLNNWHNTWDQFYVYWICPFTGAILAAWIFRAIFPPPVKQKKSIKKQE 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02651 249 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre14g02651 249 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre14g02651 249 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre14g02651 249 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre14g02651 249 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre14g02651 249 PRINTS Major intrinsic protein family signature 58 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre14g02651 249 FunFam Aquaporin SIP1-1 2 248 - -
Trre14g02651 249 SUPERFAMILY Aquaporin-like 4 241 IPR023271 -
Trre14g02651 249 Gene3D Glycerol uptake facilitator protein. 2 247 IPR023271 -
Trre14g02651 249 PANTHER AQUAPORIN SIP1-1 4 244 IPR044222 GO:0015250
Trre14g02651 249 Pfam Major intrinsic protein 3 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02651 Trre-Chr14 26376010 26380063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02651 2 246 Major Intrinsic Protein MIP AT5G18290 54.251 6.72e-78 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02651 K09875 - gmx:102669186 391.734