Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02644 ATGAAACTCTTCACATTTCTACTCTTCTTAATACCTACAATCACTTCCTCACAATATTTAGGAAACAACCTATTCACTAATCGAAAAATATTCACAAAACAAGAAACAATTACCTCGTACGCTGTCGTATTTGATGCCGGTAGCACCGGTAGCCGTGTTCATGTCTACCATTTTGACCAGAACTTGGATCTTCTTCATATTGGCAAAGATGTTGAGTATTATAATAAGATAACACCTGGTTTGAGTGCATATGCGGATAATCCAGAACAAGCTGCAAAATCTTTGATTCCACTTTTAGAGCAAGCAGAAAATGTGGTCCCGGAGGATTTTCATTCCAAAACACCCATTAGAGTTGGAGCAACTGCAGGTTTAAGGCTTTTGGATGGAGATGCTTCTGAAAAGATATTACAAGCGGTAAGGAATATGCTGAGCAATAGAAGTACCTTCAACGTTCAACCTGATGCAGTAACTATTATTGATGGAACCCAAGAAGGTTCTTATCTATGGGTGACAGTAAACTATGTATTGGGGAATTTGGGGAAAAGATTCACAAATACAGTGGGAGTAATTGACCTTGGAGGTGGATCAGTTCAAATGGCATATGCTGTATCAAAGAAAACAGCAAGAAATGCTCCAAAAGTTACTGATGGAGAGGATCCATACATTAAGAAGATAGTACTCAAGGGAAAACCATATGATCTCTATGTTCACAGTTACTTACACTTTGGTAGAGAAGCATCCCGAGCAGAGATTTTGAAGGTCACTCATGGTTCTGCCAGCCCTTGCATTTTAGCTGGATTTGATGGAATCTACACATATTCAGGTGAAGAGTTTAAGGCCAGTGCCCCTACTTCTGGAGCCAACTTTGATAAATGCAAAAAGATAATTCAAAAGGCTCTTAAATTGGATTATCCATGTCCTTATCACAATTGCACTTTTGGTGGAATATGGAATGGTGGAGGAGGAAGTGGACAGAAGAAACTTTTTGCTGCTTCATCTTTCTTTTACCTACCTCAAGAAGTTGGTATGGTTGATCCAAATAAATCTAATTTAAAACTTCGTCCAGTGGATCTTGAGAATAAAGCTAAGATAGTTTGTACATTAAATGTTGAGGATGCAAAATCAGCTTATCCACTTCTTGAGAAGTTCAATATAGTTCCATATGCATGCATGGATCTTATATATCAGTATGAGTTGCTTGTTGAAGGATTTGGCCTAGATCCATTGCAAGAGATTACAGCAGGGGAGAAAATTGAATATCAAGATGCTTTTGTGGATGCTGCATGGACTCTAGGCAATGCTGTAGAAGCCATATCATCGTTACCTAAATTTGAACGATTGATGTATTTTGTTTAA 1356 0.3813 MKLFTFLLFLIPTITSSQYLGNNLFTNRKIFTKQETITSYAVVFDAGSTGSRVHVYHFDQNLDLLHIGKDVEYYNKITPGLSAYADNPEQAAKSLIPLLEQAENVVPEDFHSKTPIRVGATAGLRLLDGDASEKILQAVRNMLSNRSTFNVQPDAVTIIDGTQEGSYLWVTVNYVLGNLGKRFTNTVGVIDLGGGSVQMAYAVSKKTARNAPKVTDGEDPYIKKIVLKGKPYDLYVHSYLHFGREASRAEILKVTHGSASPCILAGFDGIYTYSGEEFKASAPTSGANFDKCKKIIQKALKLDYPCPYHNCTFGGIWNGGGGSGQKKLFAASSFFYLPQEVGMVDPNKSNLKLRPVDLENKAKIVCTLNVEDAKSAYPLLEKFNIVPYACMDLIYQYELLVEGFGLDPLQEITAGEKIEYQDAFVDAAWTLGNAVEAISSLPKFERLMYFV 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02644 451 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 159 174 IPR000407 GO:0016787
Trre14g02644 451 Pfam GDA1/CD39 (nucleoside phosphatase) family 35 442 IPR000407 GO:0016787
Trre14g02644 451 Gene3D Exopolyphosphatase. Domain 2 160 419 - -
Trre14g02644 451 CDD NBD_sugar-kinase_HSP70_actin 42 201 - -
Trre14g02644 451 Gene3D - 40 434 - -
Trre14g02644 451 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 12 441 IPR000407 GO:0016787
Trre14g02644 451 FunFam Apyrase 1 160 419 - -
Trre14g02644 451 FunFam Ectonucleoside triphosphate diphosphohydrolase 5 40 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02644 Trre-Chr14 26221826 26226861 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02644 39 440 Calmodulin-binding Proteins AT3G04080 55.335 8.61e-154 443