Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02643 ATGGAGTTCCTAATGAAACTCTTCACATTTCTACTCTTCTTAATACCTACAATCACTTCCTCACAATATTTAGGAAACAACCTATTCACTAATCGAAAAATATTCACAAAACAAGAAACAATTACCTCGTACGCTGTCGTATTTGATGCCGGTAGCACCGGTAGCCGTGTTCATGTCTACCATTTTGACCAGAACTTGGATCTTCTTCATATTGGCAAAGATGTTGAGTATTATAATAAGATAACACCTGGTTTGAGTGCATATGCGGATAATCCAGAACAAGCTGCAAAATCTTTGATTCCACTTTTAGAGCAAGCAGAAAATGTGGTCCCGGAGGATTTTCATTCCAAAACACCCATTAGAGTTGGAGCAACTGCAGGTTTAAGGCTTTTGGATGGAGATGCTTCTGAAAAGATATTACAAGCGGTAAGGAATATGCTGAGCAATAGAAGTACCTTCAACGTTCAACCTGATGCAGTAACTATTATTGATGGAACCCAAGAAGGTTCTTATCTATGGGTGACAGTAAACTATGTATTGGGGAATTTGGGGAAAAGATTCACAAATACAGTGGGAGTAATTGACCTTGGAGGTGGATCAGTTCAAATGGCATATGCTGTATCAAAGAAAACAGCAAGAAATGCTCCAAAAGTTACTGATGGAGAGGATCCATACATTAAGAAGATAGTACTCAAGGGAAAACCATATGATCTCTATGTTCACAGTTACTTACACTTTGGTAGAGAAGCATCCCGAGCAGAGATTTTGAAGGTCACTCATGGTTCTGCCAGCCCTTGCATTTTAGCTGGATTTGATGGAATCTACACATATTCAGGTGAAGAGTTTAAGGCCAGTGCCCCTACTTCTGGAGCCAACTTTGATAAATGCAAAAAGATAATTCAAAAGGCTCTTAAATTGGATTATCCATGTCCTTATCACAATTGCACTTTTGGTGGAATATGGAATGGTGGAGGAGGAAGTGGACAGAAGAAACTTTTTGCTGCTTCATCTTTCTTTTACCTACCTCAAGAAGTTGGTATGGTTGATCCAAATAAATCTAATTTAAAACTTCGTCCAGTGGATCTTGAGAATAAAGCTAAGATAGTTTGTACATTAAATGTTGAGGATGCAAAATCAGCTTATCCACTTCTTGAGAAGTTCAATATAGTTCCATATGCATGCATGGATCTTATATATCAGTATGAGTTGCTTGTTGAAGGATTTGGCCTAGATCCATTGCAAGAGATTACAGCAGGGGAGAAAATTGAATATCAAGATGCTTTTGTGGATGCTGCATGGACTCTAGGCAATGCTGTAGAAGCCATATCATCGTTACCTAAATTTGAACGATTGATGTATTTTGTTTAA 1368 0.3816 MEFLMKLFTFLLFLIPTITSSQYLGNNLFTNRKIFTKQETITSYAVVFDAGSTGSRVHVYHFDQNLDLLHIGKDVEYYNKITPGLSAYADNPEQAAKSLIPLLEQAENVVPEDFHSKTPIRVGATAGLRLLDGDASEKILQAVRNMLSNRSTFNVQPDAVTIIDGTQEGSYLWVTVNYVLGNLGKRFTNTVGVIDLGGGSVQMAYAVSKKTARNAPKVTDGEDPYIKKIVLKGKPYDLYVHSYLHFGREASRAEILKVTHGSASPCILAGFDGIYTYSGEEFKASAPTSGANFDKCKKIIQKALKLDYPCPYHNCTFGGIWNGGGGSGQKKLFAASSFFYLPQEVGMVDPNKSNLKLRPVDLENKAKIVCTLNVEDAKSAYPLLEKFNIVPYACMDLIYQYELLVEGFGLDPLQEITAGEKIEYQDAFVDAAWTLGNAVEAISSLPKFERLMYFV 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02643 455 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 11 445 IPR000407 GO:0016787
Trre14g02643 455 FunFam Apyrase 1 164 423 - -
Trre14g02643 455 Pfam GDA1/CD39 (nucleoside phosphatase) family 39 446 IPR000407 GO:0016787
Trre14g02643 455 Gene3D Exopolyphosphatase. Domain 2 164 423 - -
Trre14g02643 455 FunFam Ectonucleoside triphosphate diphosphohydrolase 5 44 173 - -
Trre14g02643 455 CDD NBD_sugar-kinase_HSP70_actin 46 205 - -
Trre14g02643 455 Gene3D - 44 438 - -
Trre14g02643 455 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 163 178 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02643 Trre-Chr14 26221826 26226873 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02643 43 444 Calmodulin-binding Proteins AT3G04080 55.335 1.59e-153 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02643 K14641 - ag:CAA83655 730.709