Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02640 ATGAAACTCTTCACATTTCTACTCTTCTTAATACCTACAATCACTTCCTCACAATATTTAGGAAACAACCTATTCACTAATCGAAAGATTTTCTTAAAACAAGAAACAACTACCTCGTACGCTGTTGTATTTGATGCTGGTAGCACCGGTAGCCGTGTTCATGTCTACCATTTTGACCAGAACTTGGATCTTCTTCATATTGGCAAAGATGTTGAGTTTTATAATAAGATAAAACCTGGGTTGAGTGCATATGCGGATAATCCAGAACAAGCTGCAAAATCATTGATTCCACTTTTAGAGCAAGCAGAAAATGTGGTCCCGGAGGATTTTCAATCCAAGACACCCATTAGAGTTGGGGCAACTGCAGGTTTAAGGCTTTTGGATGGAGATGCTTCTGAAAAGATATTACAAGCTGTAAGGAATATGCTGAGCAACAGAAGTACTTTCAACGTTCAACCTGATGCAGTTTCTATTATAGATGGAACCCATGAAGGTTCTTATTTATGGGTGACAGTAAACTATGTATTCGGGAATTTGGGAAAAAAGTACACAAAAACCGTGGGAGTAATGGATCTCGGAGGTGGATCAGTTCAAATGACATATGCAGTGTCAAAGAAAACAGCAAAAAATGCTCCAAAAGTTGCAGATGGAGATGATCCATACATTAAGAAGATTGTACTCAAGGGAAAACCATATGATCTCTATGTTCACAGTTACTTACACTTTGGTAGAGAAGCATCTCGAGCGGAGATTTTGAAGGTCACTCATGGTTTTGCCAGCCCTTGCATTTTAGCTGGATTTGATGGAATCTACACATATTCAGGTGAAGAGTTTAAGGTCAGTTCCCCTACTTCTGGAGCCAACTTTGAGAAATGCAAAAAGATAATTCAAAAGGCTCTTAAATTGGATTATCCATGTCCTTATCAAAATTGCACTTTTGGTGGAATATGGAATGGTGGAGGAGGAAGTGGACAGAAGAAACTTTTTGCTGCTTCATCTTTCTATTTCCTACCTGAAGAAGTTGGTATGGTTGATCCAAATAAATCTAATTTAGAACTTCGTCCAGTGGATCTTGAGAATAAAGCTAAGATAGTTTGTACATTAAATGTTGAGGATGCAAAATCTGCTTATCCACTTGTTGTGAAGTTCAATACAGCTCCATATATATGCATGGATCTTATATATCAGTATGAGTTGCTTGTTGAAGGATTTGGCCTAGATCCATTGCAAGAGATTACAACAGGGGCGAAAATTGAATATCAAGATGCTTTTGTGGATGCTGCATGGCCTCTCGGCAATGCTGTAGAAGCCATATCATCTTTACCTAAATTTGAAAGATTGATGTATTTTGTTTAA 1356 0.3791 MKLFTFLLFLIPTITSSQYLGNNLFTNRKIFLKQETTTSYAVVFDAGSTGSRVHVYHFDQNLDLLHIGKDVEFYNKIKPGLSAYADNPEQAAKSLIPLLEQAENVVPEDFQSKTPIRVGATAGLRLLDGDASEKILQAVRNMLSNRSTFNVQPDAVSIIDGTHEGSYLWVTVNYVFGNLGKKYTKTVGVMDLGGGSVQMTYAVSKKTAKNAPKVADGDDPYIKKIVLKGKPYDLYVHSYLHFGREASRAEILKVTHGFASPCILAGFDGIYTYSGEEFKVSSPTSGANFEKCKKIIQKALKLDYPCPYQNCTFGGIWNGGGGSGQKKLFAASSFYFLPEEVGMVDPNKSNLELRPVDLENKAKIVCTLNVEDAKSAYPLVVKFNTAPYICMDLIYQYELLVEGFGLDPLQEITTGAKIEYQDAFVDAAWPLGNAVEAISSLPKFERLMYFV 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02640 451 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 159 174 IPR000407 GO:0016787
Trre14g02640 451 Pfam GDA1/CD39 (nucleoside phosphatase) family 34 442 IPR000407 GO:0016787
Trre14g02640 451 Gene3D - 40 434 - -
Trre14g02640 451 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 12 441 IPR000407 GO:0016787
Trre14g02640 451 FunFam Ectonucleoside triphosphate diphosphohydrolase 5 40 169 - -
Trre14g02640 451 CDD NBD_sugar-kinase_HSP70_actin 42 229 - -
Trre14g02640 451 Gene3D Exopolyphosphatase. Domain 2 160 419 - -
Trre14g02640 451 FunFam Apyrase 1 160 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02640 Trre-Chr14 26075618 26092415 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02640 39 440 Calmodulin-binding Proteins AT3G04080 53.846 2.74e-150 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02640 K14641 - ag:CAA83655 728.398