Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02636 ATGTTGAAGTTGATGATTCAAGGTGCTTATGATAATGAAGAGACTGAAGCACATGCTTATGATCTAGCAGCATTGAAATATTGGGGTCAAGATACCATTATTAATTTTCCGTTATCAAACTATGAGAAAGAACTGATTGAAATGGAGAGTCAATCAAGGGAAGAGTATATTGGATCCTTAATAAGGAAAAGCAGTGGTTTTTCTAGGGGAGTTTCTAAATACATTTTAATAATAGGTAGCTCATGGATTTTTTTTGGGGAAGAGGCGAGGCTCCTTTTATTTGTATCGGTTGTTGTTTTATTGTGCTGTCATTGA 315 0.3492 MLKLMIQGAYDNEETEAHAYDLAALKYWGQDTIINFPLSNYEKELIEMESQSREEYIGSLIRKSSGFSRGVSKYILIIGSSWIFFGEEARLLLFVSVVVLLCCH 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02636 104 Gene3D AP2/ERF domain 3 39 IPR036955 GO:0003700|GO:0006355
Trre14g02636 104 ProSiteProfiles AP2/ERF domain profile. 1 37 IPR001471 GO:0003700|GO:0006355
Trre14g02636 104 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 7 74 - -
Trre14g02636 104 SUPERFAMILY DNA-binding domain 6 39 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02636 Trre-Chr14 26046783 26047694 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02636 8 74 AP2-EREBP Transcription Factor Family AT3G54320 70.149 3.54e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02636 K09285 - apan:127264853 121.709