Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02625 ATGGAAACCCCACAAACCAATTTGCCCCCAGGTTTTAGGTTCCACCCTACTGATGCAGAACTCATTCTTCACTACCTTAGGAAAAAAATTGCCTCCATTCCCTTGCCTGTTTCCATCATTGCTGAAGTTGATATTTACAAGTTGGACCCTTGGGATTTACCAGCTAAGGCTTTGTTTGGTGAGAAAGAATGGTACTTTTTTAGTCCTAGAGATAGAAAGTATCCAAATGGTGCAAGGCCAAACAGGGCAGCTGCTTCAGGTTATTGGAAGGCCACTGGCACTGATAAGACTATAGTTGCATCATTGCCAATTGGAGGAGGAAGAGCTCAAGAGAACATTATTGGTGTCAAAAAGGCTCTTGTATTTTACAAAGGGAAACCACCAAAGGGTATTAAGACTAATTGGATCATGCATGAATATCGTCTTGTTGATAATAATAAACCTATTAAGCTCAAAGATTCTTCCATGAGGTTGGATGATTGGGTACTATGCCGAATTTACAAGAAATCAAAATGTGCACTAACTTCATCAGAATCATCGTCAGAAACAATGGTGGGCGAAGTAGAACACGCAGAAGAGGCGCAATTCAAGGAAACCCTTTTCCCGATCACAAAAAACAACACAACCTTTCCTTATCAAAACAACCTTATATCTCAAAAATCAGTGTCCTTTTCCAACCTATTAGATGCTATGGACTACTCCATGTTGAGTAGCTTCTTATCTGAAAACCATTCAAACCCATCAGGAATTGGATCAAGTTCAAGCTTCAACACTGAAAATTTTAATCAACAACAATCCTCTCAAATCAATACTAGCAACAATTACATGTCTCAAAATAAAAATCCTCAATTGAACACTTTAAAGCACCAACTTTCAAACATAGATGAGGACAACACTTCATTATACCCATCAAAGAAATATTTGAGTTCATCTTGCAATTTCCCTAACATCAATTCACAATATGAAAACTATCTCATGAAGCAATCTTTGATGAATCAGCAATTAATTCTAGGTCCTCATCTCCAATATCAAGGCTAA 1038 0.3776 METPQTNLPPGFRFHPTDAELILHYLRKKIASIPLPVSIIAEVDIYKLDPWDLPAKALFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVASLPIGGGRAQENIIGVKKALVFYKGKPPKGIKTNWIMHEYRLVDNNKPIKLKDSSMRLDDWVLCRIYKKSKCALTSSESSSETMVGEVEHAEEAQFKETLFPITKNNTTFPYQNNLISQKSVSFSNLLDAMDYSMLSSFLSENHSNPSGIGSSSSFNTENFNQQQSSQINTSNNYMSQNKNPQLNTLKHQLSNIDEDNTSLYPSKKYLSSSCNFPNINSQYENYLMKQSLMNQQLILGPHLQYQG 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02625 345 FunFam NAC transcription factor 56 17 174 - -
Trre14g02625 345 ProSiteProfiles NAC domain profile. 8 169 IPR003441 GO:0003677|GO:0006355
Trre14g02625 345 Pfam No apical meristem (NAM) protein 9 142 IPR003441 GO:0003677|GO:0006355
Trre14g02625 345 PANTHER NAC TRANSCRIPTION FACTOR 56 8 250 - -
Trre14g02625 345 SUPERFAMILY NAC domain 4 169 IPR036093 GO:0003677|GO:0006355
Trre14g02625 345 Gene3D NAC domain 17 173 IPR036093 GO:0003677|GO:0006355
Trre14g02625 345 MobiDBLite consensus disorder prediction 248 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02625 Trre-Chr14 25839699 25841147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02625 4 345 NAC Transcription Factor Family AT3G04070 52.958 4.91e-110 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Trre14g02625 NAM 5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02625 - - tpra:123890056 655.981