Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02606 ATGCCAGAGTTGAGAAGTGGAGCTAGAAGGTCAAAGCGGCTTGGAGATCTTCAGACTGGTCCACTACCTGTTGATCAAGGAGAGAATTGGGCAGAGCCTGCGCAGAATAGAACTAGAAGGAGAGTTGGAGGTGGAAGAGGAAGAGTTGGTAATGCCACAGGTTTAGGTAAAGGGTCTTCACCAGCTGTACCCACAAGACGAACTGCAGCTGGTAGAGGCCGCGGAGCAAGATTGATTGATTTGGATCCTGAACCCTGTGAGGTACTTCCAGAACCTGTTGCATTAAGGGCTCAGGAACCTGTTTACAATCACGTAGAGGTAGTGGCCAATAATAACATTTTGATGGAGGGTGGAAGCGGTGATAAAGCGGCAGCAGCTGAAGAGGAAGCAACCACAACCCCTGTCCCTGATAGGGTACAAGTTGGTAACTCTCCTGTATATAAGACAGAAAGGAAGTTGGGTAAGGGTGGTTTTGGCCAAGTGTATGTTGGCAGAAGGGTTAGCGGTGGCTCTGATCGAGTAGGTCCTGATGCTATTGAGGTTGCACTCAAGTTTGAGCATAGAAACAGTAAAGGTTGTAATTATGGGCCTCCTTATGAGTGGCAAGTTTACAGTACTCTGAATGGCTGTTATGGCATTCCTGGGGTTCATTACAAGGGTCGACAAGGAGATTTCTACATTTTGGTGATGGACATACTTGGACCCAGCCTTTGGGATGTGTGGAATTCTCTTGGTCAATCGATGTCGCCGAGTATGGCTGCTTGCATTGCAGTGGAGGCAATATCAATTCTTGAGAAGCTCCATTTGAAAGGGTTTGTGCACGGAGATGTAAAACCAGAAAACTTTTTGCTTGCTTCTAAATGGAAGGATGCATCATCTGGCCAACACGTTGAATATGATCAGAGACCTGATATATTCAGGGGAACAATAAGGTATGCTAGTGTACATGCACATTTAGGTAGGACTGGTAGTCGAAGGGATGATCTTGAGTCACTGGCATATACATTGATATTTCTCATTAAAGGGAGATTGCCGTGGCAGGGTTATCAGGGTGACAATAAAAGTTTTCTTGTTTGTAAGAAAAAAATGTCCACTTCTGCGGAGTTGATGTGCTGTTTTTTTCCTGCTCCATTTAAGCTGTTCCTAGAAGCAGTTACTAACATGAGATTTGATGAGGAGCCAAATTATTCCAAACTTATATCACTCTTTGACAGCTTGATCGAACCATGCACTCCATTAAGACCTATTAGAATTGATGGAGCTTTGAAGGTCGGTCAAAAGCGAGGAAGGATGCTTATAAATCTGGAAGAAGATGAGCAGCCTAAGAAAAAAGTGCGATTGGGGAGTCCTGCCACTCGGTGGATATCTGTGTATAATGCACGCCGTCCCATGAAGCAAAGATATCACTATAACGTAGCGGACAATAGGCTCCGGCAGCATGTAGACAAGGGTATTGAGGATGGGCTGTATATAAGCTGTGTGGCCTCTTCAGCAAATTTGTGGGCCCTAATCATGGATGCAGGAACAGGTTTTTCTTCCCAGGTTTATGAGTTATCACCGGCCTTCCTGCACAAGGATTGGATTATGGAGCAATGGGAGAAAAATTACTATATCAGTTCAATAGCTGGTGCAGTTAATGGCAGTTCCTTGGTTGTCATGTCCAAAGGAACTCCTTATACACAACAGTCCTACAAAGTGAGCGAATCATTTCCTTTCAAATGGATAAACAAGAAATGGAAAGAAGGGTTCCATGTTACCTCCATGACTACTGCTGGCAGTCGTTGGGGTGTTGTTATGTCCAGAAATGCTGGGTATTCTGATCAGGTTGTGGAGCTTGACTTTTTGTATCCAAGTGAAGGAATCCATCGGCGATGGGAGAATAATTACCGAATTACTTCTATGGCTGCTACTAATGATCAGGCAGCCTTCATACTAAGCATACCGAAACGGAAATTAGTTGATGAAACTCAAGAGACTTTGCGGACATCTGCTTTCCCTAGCACCCATGTAAAGGAAAAATGGTCGAAGAATCTCTACATTGCCTCGATATGTTACGGACGAACTGTTTGCTAG 2073 0.4448 MPELRSGARRSKRLGDLQTGPLPVDQGENWAEPAQNRTRRRVGGGRGRVGNATGLGKGSSPAVPTRRTAAGRGRGARLIDLDPEPCEVLPEPVALRAQEPVYNHVEVVANNNILMEGGSGDKAAAAEEEATTTPVPDRVQVGNSPVYKTERKLGKGGFGQVYVGRRVSGGSDRVGPDAIEVALKFEHRNSKGCNYGPPYEWQVYSTLNGCYGIPGVHYKGRQGDFYILVMDILGPSLWDVWNSLGQSMSPSMAACIAVEAISILEKLHLKGFVHGDVKPENFLLASKWKDASSGQHVEYDQRPDIFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVCKKKMSTSAELMCCFFPAPFKLFLEAVTNMRFDEEPNYSKLISLFDSLIEPCTPLRPIRIDGALKVGQKRGRMLINLEEDEQPKKKVRLGSPATRWISVYNARRPMKQRYHYNVADNRLRQHVDKGIEDGLYISCVASSANLWALIMDAGTGFSSQVYELSPAFLHKDWIMEQWEKNYYISSIAGAVNGSSLVVMSKGTPYTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGSRWGVVMSRNAGYSDQVVELDFLYPSEGIHRRWENNYRITSMAATNDQAAFILSIPKRKLVDETQETLRTSAFPSTHVKEKWSKNLYIASICYGRTVC 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02606 690 CDD STKc_CK1 147 403 - -
Trre14g02606 690 ProSitePatterns Protein kinases ATP-binding region signature. 153 184 IPR017441 GO:0005524
Trre14g02606 690 PANTHER CASEIN KINASE-RELATED 147 655 - -
Trre14g02606 690 ProSiteProfiles Protein kinase domain profile. 147 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g02606 690 Gene3D Transferase(Phosphotransferase) domain 1 116 445 - -
Trre14g02606 690 SUPERFAMILY Protein kinase-like (PK-like) 147 416 IPR011009 -
Trre14g02606 690 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Trre14g02606 690 SMART serkin_6 147 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g02606 690 Pfam Protein kinase domain 147 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g02606 690 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02606 Trre-Chr14 25430146 25435888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02606 121 291 EF-hand Containing Proteins AT5G66210 27.778 4.79e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Trre14g02606 Pkinase 1.3e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02606 - - tpra:123890076 1309.66