LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre14g02575	ATGGTGAGTGTCCTATCTCATTCAACTATCATTCCCTCTAAACCAACCCCTAATCCAAAACTCTACTCATTATGTGAACAAATCAAGCTTCGTACTCATGCTCCTCTCCTTTATGTCTACAAACCACATAATAATCACAACACATCAACCTTTCTTCAAACACTTCAAAACTCTCTTAGCCAAGCTTTGGTTATTTACTATCCACTAGCTGGAAGATTGAGTTGGATCAATGGAGGAGGAAGATGGGAAATTCATTGCAATTCCAAAGGAGCACTTTTCTTAGAAGCTAAATGTGAAGAATTAACCAATTTGAATCAATTGGGTGATTTTGTACCAACTAATTTGGTGTCAAAACTCATACCAAATATTAATTACAATCTTCCTCTTGAAGACATTCCCTTATTGGCTGTGCAACTAACGAGGTTTCCATGTGGAGGTTTTACGCTAGGCGTTGCTTTATGTCGAGCTGCAACCGATGGAACTGCAACCATGCGTTTTATGAATGCATGGGCTAAGCTTGCGCGTGGGGAGAATTTGAACCCAAATGAGTTTCCATGTCATGATCGAACCATGTTAAATTCGCGCAAACTAACACATTTGCCGTCCTTGAATTGGCCGCACCGTGAGTTTAATGCGCCTCCTATTTGGGTGGGTAGTGATTTGAATGGCAATATAGAAGTAAGTGTTGCTATTGTGAAACTCACCCGAGAACAAGTTTTAAAGCTCAAGAAAAAAGCTAGTTCTCGAGTGAGTTTTCAACCCAGCTCCGAAGATGTCCACCGAACAAAACCTTATTCAACTTTTGAGGTTATTGCAGGACATCTTTGGAAGTGTGTTACCAAAGCACGCCACATAGGAAATAATGATCAACCAACGAGGTTGTCCACATTGGTTAATTGTCGAAATCGTTTACAACCTCCACTTCCAAATGGTTATGTTGGAAATGCAGCATTTCCAACCGTGACGCCAACTCGTTCCTTTAATGATCTTATTTGCAAACCTTTGGGTGATGCAGTTGAGGATGTTAAGAAAGCAATTGAAAGGGTGAACGGGGAATATGTAACGTCCGCACTTAATTACATAGATCGCGAGAAGAACATGGATTTGTTGAGGTATAATTTTCACTATCCTGCAAAGAGTGTAATTGATGAGGGACAATATAAGGGGAATCCTAATCTTTTTGTTGTAAGTTGGATGAATTTTTCGTATAAGGATGCAAATTTTGGATTGGGAGAACCTATTTATTTTGGACCAGGGTACATGGATTCTGAAGGAAAGGTGTTCATTATGAATAATAATAATGGTGATGGTATTGTGGTGGCTATTTCTTTAGAAGCATCTTTTATGGATAGTTTTAAGAAATTTTTTTATGATGACATTAGAGAGGTGTTTTGTAATTCTAAATTGTAG	1410	0.3865	MVSVLSHSTIIPSKPTPNPKLYSLCEQIKLRTHAPLLYVYKPHNNHNTSTFLQTLQNSLSQALVIYYPLAGRLSWINGGGRWEIHCNSKGALFLEAKCEELTNLNQLGDFVPTNLVSKLIPNINYNLPLEDIPLLAVQLTRFPCGGFTLGVALCRAATDGTATMRFMNAWAKLARGENLNPNEFPCHDRTMLNSRKLTHLPSLNWPHREFNAPPIWVGSDLNGNIEVSVAIVKLTREQVLKLKKKASSRVSFQPSSEDVHRTKPYSTFEVIAGHLWKCVTKARHIGNNDQPTRLSTLVNCRNRLQPPLPNGYVGNAAFPTVTPTRSFNDLICKPLGDAVEDVKKAIERVNGEYVTSALNYIDREKNMDLLRYNFHYPAKSVIDEGQYKGNPNLFVVSWMNFSYKDANFGLGEPIYFGPGYMDSEGKVFIMNNNNGDGIVVAISLEASFMDSFKKFFYDDIREVFCNSKL	469

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre14g02575	469	Gene3D	-	1	212	IPR023213	-
	Trre14g02575	469	Gene3D	-	222	459	IPR023213	-
	Trre14g02575	469	PANTHER	TRICHOTHECENE 3-O-ACETYLTRANSFERASE	16	456	-	-
	Trre14g02575	469	Pfam	Transferase family	1	457	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre14g02575	Trre-Chr14	25010404	25011813	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre14g02575	2	458	Monolignol Biosynthesis Gene Families	AT5G48930	35.345	2.71e-80	254

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre14g02575	K13065		-	gmx:100775549	610.142