Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02574 ATGTCTCGTTGTGTTCTTGATGGTTCCTCTGCTTCTAATTTCATCAACTCATGGGCTAAGTTTGCTAAAGGTTGTAGTAATAACTCAACCCATTTGAGAAAAAATCCATCTTTTGCCATTGCCATGTTGAAATTCACCAAAAACCAAGTTGAAAAACTCAAGAACAAAGCCAACAACAATGAAAACATGGTACGAGGTTGTGAAAACAAGGTACGAGGTTATACTAGTTTTGAGGTTATTTGTGGTTATTTATGGAGGTGTGTTAGTAAAGTGCGTTTTGAAGGTAATTGGAATCAACCAACAAGGTTAACAACTTTGGTTAATTGTAGAAATAGGTTGAATCCACCTATTCCTAAGAATTATTTTGGGAATGCAACATTTCCAACAGCTTATGTTGTTGATGAAGCTAATGGTGATGGTTTTCTTGTAACTGTTTGTTTGCAAACATTACACATAGATGCTTTGAAGAAGTTGTTTTATGAGGATATGGAGATTATCACTAGTTCCAAACTATGA 516 0.3488 MSRCVLDGSSASNFINSWAKFAKGCSNNSTHLRKNPSFAIAMLKFTKNQVEKLKNKANNNENMVRGCENKVRGYTSFEVICGYLWRCVSKVRFEGNWNQPTRLTTLVNCRNRLNPPIPKNYFGNATFPTAYVVDEANGDGFLVTVCLQTLHIDALKKLFYEDMEIITSSKL 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02574 171 Coils Coil 43 70 - -
Trre14g02574 171 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 134 - -
Trre14g02574 171 Gene3D - 16 135 IPR023213 -
Trre14g02574 171 Pfam Transferase family 39 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02574 Trre-Chr14 25008236 25009186 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02574 1 127 Monolignol Biosynthesis Gene Families AT5G48930 28.395 1.32e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02574 K13065 - gmx:100819383 120.938