Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02566 ATGGTAAGTGTCCTATCTCATTCAACTATCATTCCCTCTAAACCAACCCCTAATCCAAAACTCTACTCATTATGTGAACAAATCAAGCTTCGTACTCATGCTCCTCTCCTTTATGTCTACAAACCACTTAATAATAATAATAATAATAATAATCACAACAACACATCAACCTTCCTTCAAACACTTCAAAACTCTCTTAGCCAAGCTTTGGTTATTTACTATCCACTAGCTGGAAGATTGAGTTGGATCAATGGAGGAAGATGGGAAATTCATTGCAATTCCAAAGGAGCACTTTTCTTAGAAGCCAAATGTGAAGAAATAACCAATTTGAAACAATTGGGTGATTTTGTACCAACTAATTTGGTGTCAAAACTCATACCAAATATTAATTACAATCTTCCTCTTGAAGACATTCCCTTATTGGCTCTGCAACTAACGAGGTTTCCATGTGGAGGTTTTACGCTAGGCGTTGCTTTATGTCGAGCTGCAACCGATGGAACTGCAACCATGCTCCGGTGA 519 0.3776 MVSVLSHSTIIPSKPTPNPKLYSLCEQIKLRTHAPLLYVYKPLNNNNNNNNHNNTSTFLQTLQNSLSQALVIYYPLAGRLSWINGGRWEIHCNSKGALFLEAKCEEITNLKQLGDFVPTNLVSKLIPNINYNLPLEDIPLLALQLTRFPCGGFTLGVALCRAATDGTATMLR 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02566 172 Pfam Transferase family 1 168 - -
Trre14g02566 172 PANTHER F21J9.9 3 169 - -
Trre14g02566 172 Gene3D - 1 171 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02566 Trre-Chr14 24948883 24949401 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02566 2 166 Monolignol Biosynthesis Gene Families AT5G48930 34.940 9.65e-28 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02566 K13065 - gmx:100775549 233.032