Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02552 ATGGCTTCTTCTCGTGTAGTTGTTTTTGCATTTTCCATGGTTTTGCTTTCTTCAGTTTCAATGGCAACTGATCATATTGTGGGAGATGACAAGGGCTGGACTGTTGATTTCAATTACACTCAATGGGCTCAGGAGATGGTTTTTCTTGTTGGTGACAACCTTGTTTTCAACTATGATCCTTCAAGACACAATGTTTTCAAAGTGAATGGAACACAATTTCAAAGCTGCACTTTTCCACCAGCAAACGAAGCACTTTCCACCGGAAAAGATATTATTCCACTAAAATAG 288 0.3889 MASSRVVVFAFSMVLLSSVSMATDHIVGDDKGWTVDFNYTQWAQEMVFLVGDNLVFNYDPSRHNVFKVNGTQFQSCTFPPANEALSTGKDIIPLK 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02552 95 ProSiteProfiles Phytocyanin domain profile. 23 95 IPR003245 GO:0009055
Trre14g02552 95 CDD Phytocyanin 23 95 - -
Trre14g02552 95 FunFam Cupredoxin superfamily protein 21 95 - -
Trre14g02552 95 Gene3D - 21 95 IPR008972 -
Trre14g02552 95 SUPERFAMILY Cupredoxins 21 94 IPR008972 -
Trre14g02552 95 PANTHER BLUE COPPER PROTEIN 21 94 IPR039391 GO:0009055
Trre14g02552 95 Pfam Plastocyanin-like domain 33 95 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02552 Trre-Chr14 24697494 24697971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02552 7 94 Phytocyanin Superfamily AT5G15350 37.778 1.03e-14 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02552 - - psat:127129120 164.081