Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02516 ATGGATTTAGGTTGTAGTTTGCCACAGTCAAGAATTTTACACGGAGCCGTCGGGACTAGCTATAGACAAAAATATGCAGGTCAAGTAGGTTTTCTTGACTTTAGGAGAGGTTTTGGTTGTGGATTTTTAGGAAAAAGTGTTTTGAGATCACGTTTTAGTGTGGAGAACAAAGTTACTTGTGTTTCTTCTTGTTGGAATAATTCGAAAGTGGTTTCTGGTGGTGAGTTTAAAGTTTTGAACACAAAGAGAAGTATGTCATGCAAGAATGAGAAACTTCTTATGGGATCCAGAGTCATTTGGTTGAAATGCCAGGGTAATGATTCTTTAGCTTATGTTAATGGCAATGGCCGCAATGTTGATTATGTGGAAGGTTCGGGTGAGGAAGCAGAGGTGGTACCTATATCTAGTGTTGAACTGGATGTTCCAGTAGAAGAAGAAGGAGGGAGGGCTGAGAAGGAAATAGGAGCAGAGGAACAAAGTGTGGATGAATTGAAAGAACTATTGCAAAAAGCCTTGAAAGAGCTAGAAGTTGCACAAATAAATAGTACTATGTTTGAGGAAAAGGTTAAAAAAATATCAGAGACTGCCATCTTTTTGCATGATGAAGCAGCCCGATCTTTAAATGATGTTAATTCTACCCTTGACACCATTCAAAAAGTTGCAAATGAAGAACATCAGGCCAAAGAGGCTGTTCAAAATGCTACAATGGCTCTTTCATTAGCCGAGGCAAGACTGCAGGTAGCCAGAGAGTCTTTAGAGGCAGCAAAAGAAGTGCATGAAGGTTCTAATGAGAGTGATGGCGATAAGGACTTAACAGAAAAGCAGAGCACACTTTTTGTTGCGCAAGAAGATATAAAGGAATGCCAGGAAACTTTGGCAAATTGTGAGGTAGAATTGAGGCGCTTGCAAAATAAAAAGGAGGAGTTGCAAAACGAAGCTAACAAATTGCAAGAAATTGCTGAAAAGGCACAGCTGGATGCAGTGAAAGCTGAGGAGGATGTTACAAACATAATGCTTTTAGCAGAGCAAGCTGTTGCATTTGAACTCGAGGCTACACAACGTGTGAATGATGCTGAGATTGCTCTACAAAGAGCTAATAAGTCTTTTACAAATTTGAATGCTGACACTGCAGAAACTATACAAGTACAAGATGTCGTGCTTGTTTCTGAGGAGGAGAACAATGTAGAAAGTTTTTCTGATGATGTCACAGTTGGTAGAGACAAAGATTTGGCCACAATTGATGATGCATCTTTGCCTGCCAAGTTATCATCTGAAACAGAATCTGAAAAAACCATCCAAATTTCAGAAGACACAGCACAGTCTGATTATATAAGTGATAGTGAGAATGCCGTCCAAACAAAAAAGCAGGAAACACAGAAAGATTTGACTAAAGATAGTTCACCATTTGCTCCCAAAGCATTATCGAAAAAGTCATCTCGATTCTTTTCTGCATCGTTCTTTTCTTTTACTGAAGAGGAGGCTGAGTCCACACCAGCATCAGTTTTCCAAGGCCTCATATTATCCGCAAAGAAGCAGTTGCCCAAGCTAGTTCTAGGGCTATTGTTAATGGGTGCAGGAGCTGCTGTCTATGCCAATAGGGCAGAGAAAAATGCTCAGTTCCTTCAACAGCCAGATGTTATTGTGACCAGTGCGGAAGAATTTTCTTCTAATGCAAAGCCTCTATTTAGAAAACTCCAGAAAATCCCCAAGAAAATTAAGAAAATCATTGCGTCATTACCTCATCAAGAGGTGAATGAGGAAGAAGCCTCCCTCTTTGACATGCTCTGGTTATTACTTGCAAGTGTTATATTTGTGCCAATATTTCAAAAAATCCCTGGAGGTAGTCCTGTTCTTGGCTACTTGGCTGCTGGTATCTTGATTGGGCCTTACGGTCTCTCTATCATTCGTCATGTTCATGCGACAAAAGCAATAGCTGAGTTTGGAGTTGTTTTCCTTTTATTCAATATTGGCCTGGAGCTCTCTGTTGAAAGGCTCAGTTCTATGAAGAAATATGTTTTTGGATTAGGTTCTGCGCAGGTTTTGGCAACTGCTGCAGTTGTTGGCTTGGTGGCTCATTATGTCTGTGGCCTTCCTGGCCCTGCTGCTATAGTCATCGGGAATGGCCTGGCTTTATCATCCACTGCCGTTGTTCTGCAGGTGTTGCAGGAAAGAGGCGAGAGCACATCACGGCATGGGCGAGCTACATTTTCTGTTTTACTTTTTCAGGATTTGGCTGTTGTTGTCTTGCTAATACTCATACCTCTTATTTCACCAAATTCTTCCAAAGGAGGGGTTGGTTTTCAAGCCATTGCTGAAGCTCTTGGACTGGCAGCTGTTAAGGCAGCAGTTGCCATTACTGCCATAATTGCAGGTGGACGATTGCTCCTTCGGCCAATATACAAGCAAGTTGCAGAAAATCAAAATGCTGAAATCTTCTCAGCCAATACACTTCTTGTTATTCTTGGGACCAGTCTTCTTACCGCCAGGGCAGGACTTTCAATGGCACTGGGAGCATTTTTGGCTGGTTTACTACTGGCAGAAACTGAATTTTCCTTGCAGGTTGAATCTGATATTGCACCATATCGTGGCCTTCTTTTGGGGCTCTTCTTTATGACGGTTGGAATGTCAATCGATCCAAAACTTTTTGTTTCAAACTTCCCAGTCGTCACGGGGACACTGGCACTCTTAATATGTGGAAAGACTATCTTAGTTTCTTTGATGGGTAGAATCTTTGGGATTTCCCTCATTTCTGCTTTAAGAGCCGGTCTTCTTCTTGCTCCTGGTGGAGAATTTGCATTTGTGGCTTTTGGTGAAGCTGTTAATCAGGGCATAATGTCTTCCCAGCTATCTTCTTTGCTGTTTCTTGTTGTGGGCATTTCAATGGCCATCACTCCATGGCTTGCTGCAGGAGGCCAGCTGATTGCTTCCCGTTTTGAGCAGCATGATGTTAGAAGTTTATTACCTGTAGAAAGTGAGACAGATGATCTGCAAGATCATATTATTATTTGTGGATTTGGACGAGTTGGCCAGATCATTGCGCAACTTCTTTCTGAGCGACTTATTCCATTTGTTGCACTAGATGTGAGAAGTGAAAGAGTGGCAGTTGGGCGAGCCCTGGATCTCCCTGTGTACTTTGGAGATGCTGGCAGTCGAGAGGTCCTACATAAGGTCGGGGCTGAGAGGGCATGTGCTGCAGCTATAACTCTAGATACGCCTGGAGCAAATTATAGAACAGTTTGGGCTCTGAGCAAGTACTTCCCAAATGTGAAGACTTTTGTGCGTGCCCATGACGTTGATCATGGATTGAATTTAGAAAAGGCCGGAGCTACTGCGGTGGTCCCAGAGACCTTGGAACCAAGTCTTCAACTAGCAGCTGCTGTACTTGCTCAGGCTAAACTCCCCGCATCAGAGATTTCAGCGACTATAAATGAATTCCGATGCCGACATCTAGCTGAGCTTACAGAGCTGTGTGAAGCAAGTGGAAGTTCACTTGGTTATGGATATACTAGAATTATGAGCAAATCCAAATCTCAATCCCCAGATACATTAGATTTAGATGAGACCCAAGTCTCTGAAGGGACACTGGCAGTATGA 3594 0.4254 MDLGCSLPQSRILHGAVGTSYRQKYAGQVGFLDFRRGFGCGFLGKSVLRSRFSVENKVTCVSSCWNNSKVVSGGEFKVLNTKRSMSCKNEKLLMGSRVIWLKCQGNDSLAYVNGNGRNVDYVEGSGEEAEVVPISSVELDVPVEEEGGRAEKEIGAEEQSVDELKELLQKALKELEVAQINSTMFEEKVKKISETAIFLHDEAARSLNDVNSTLDTIQKVANEEHQAKEAVQNATMALSLAEARLQVARESLEAAKEVHEGSNESDGDKDLTEKQSTLFVAQEDIKECQETLANCEVELRRLQNKKEELQNEANKLQEIAEKAQLDAVKAEEDVTNIMLLAEQAVAFELEATQRVNDAEIALQRANKSFTNLNADTAETIQVQDVVLVSEEENNVESFSDDVTVGRDKDLATIDDASLPAKLSSETESEKTIQISEDTAQSDYISDSENAVQTKKQETQKDLTKDSSPFAPKALSKKSSRFFSASFFSFTEEEAESTPASVFQGLILSAKKQLPKLVLGLLLMGAGAAVYANRAEKNAQFLQQPDVIVTSAEEFSSNAKPLFRKLQKIPKKIKKIIASLPHQEVNEEEASLFDMLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHATKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLATAAVVGLVAHYVCGLPGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAVAITAIIAGGRLLLRPIYKQVAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLFVSNFPVVTGTLALLICGKTILVSLMGRIFGISLISALRAGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMAITPWLAAGGQLIASRFEQHDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSERVAVGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPASEISATINEFRCRHLAELTELCEASGSSLGYGYTRIMSKSKSQSPDTLDLDETQVSEGTLAV 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02516 1197 MobiDBLite consensus disorder prediction 1174 1197 - -
Trre14g02516 1197 MobiDBLite consensus disorder prediction 419 472 - -
Trre14g02516 1197 Coils Coil 355 375 - -
Trre14g02516 1197 Gene3D - 587 975 IPR038770 -
Trre14g02516 1197 Coils Coil 238 258 - -
Trre14g02516 1197 ProSiteProfiles RCK N-terminal domain profile. 999 1121 IPR003148 GO:0006813
Trre14g02516 1197 FunFam K(+) efflux antiporter 2 chloroplastic 995 1159 - -
Trre14g02516 1197 FunFam K(+) efflux antiporter 2 chloroplastic 587 973 - -
Trre14g02516 1197 MobiDBLite consensus disorder prediction 419 452 - -
Trre14g02516 1197 Pfam TrkA-N domain 1000 1113 IPR003148 GO:0006813
Trre14g02516 1197 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 196 1179 - -
Trre14g02516 1197 Coils Coil 285 333 - -
Trre14g02516 1197 Coils Coil 154 181 - -
Trre14g02516 1197 Gene3D - 995 1159 - -
Trre14g02516 1197 MobiDBLite consensus disorder prediction 252 271 - -
Trre14g02516 1197 Pfam Sodium/hydrogen exchanger family 597 967 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trre14g02516 1197 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 996 1135 IPR036291 -
Trre14g02516 1197 NCBIfam monovalent cation:proton antiporter-2 (CPA2) family protein 598 878 IPR004771 GO:0006812|GO:0008324|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02516 Trre-Chr14 24292642 24312659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02516 85 1197 Inorganic Solute Cotransporters AT4G00630 69.735 0.0 1406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02516 K03455 - gmx:100798822 1738.01