Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02499 ATGGATCACGGGGACCATATGGCGTTACCCGGTTCTGCATCATACTATATGCAGCAGAGAGGACTAGCTGGTTCTGGAGCACAACCTGAGTTACACGTTTCGCCGAGTTTTAATCAACTGTCTAATCCCAATCTACCATTTCAATCCAGCATTGGTGGTGGTAGTAACATTGGATCAACATTACCTTTAGAATCTTTACCAATTTCATCTCAAGGTGTCAATGTGAGTGGTCCTACCGGGGTACCATCTGGGGAGATTGTGAAAAGGAAGAGAGGAAGGCCGAGGAAATATGGCTCTGATAGAGTTGTGTCATTGGCACTGAGTTCAAGTCCAGCACCATCTAGTAATCCCGGAACCGCGACGCAAGGAGGCCCGAAACGAGGGAGAGGGCGTCCACTTGGGAGTGGGAAGAAACAACAATTGGCTTCTTTTGGTGAGTCGATGCCTGGTTCAGCTGGGATGGGATTCACTCCACATGTCGTTCATGTTGCAATTGGTGAAGACATTTCAGCAAAAGTCATAGCATTGTCTCAGGTGCGGGCTAGGGCTTTATGTGTCCTTTCCGGTTTTGGCAGTGTCTCAGCTGTCACACTTGGTCAGCCTTCAAGTTCAGGTGGCACTGTTCAATATGAGGGACATTTTGAAATCCTGAGCTTGTCAGGCTCTTTGTTGCCAACTGAGAATGGCAGCATACGGGACCGAGCTGGTGGGATAAGTGTTATGCTTTCTAGTCCTGACGGCCGCATCTTTGGTGGAAGAGTTGCTGGGCAGCTAATTGCTTCAGCTCCTACCAAGGTTATGGTTGGGACCTTTCTATGGGGTAGATTAAATGCAAAGAACAAGAAAAAGGAAAGCTCAGAAGATGCTGAAGGTGCTGTGGAATCAGTTCATCAAGGAGCTCATAATCCAGGTGCACTGAATAGCATTTCACCAAACCAAAATCTGACTCCAACCTCATCTTTAAGTCCTTGGTCAGCAGCATCGCGTCCGATGGATATGCGTAATTCTCACGCTGACATTGATTTAATGCGTGGTTGA 1038 0.475 MDHGDHMALPGSASYYMQQRGLAGSGAQPELHVSPSFNQLSNPNLPFQSSIGGGSNIGSTLPLESLPISSQGVNVSGPTGVPSGEIVKRKRGRPRKYGSDRVVSLALSSSPAPSSNPGTATQGGPKRGRGRPLGSGKKQQLASFGESMPGSAGMGFTPHVVHVAIGEDISAKVIALSQVRARALCVLSGFGSVSAVTLGQPSSSGGTVQYEGHFEILSLSGSLLPTENGSIRDRAGGISVMLSSPDGRIFGGRVAGQLIASAPTKVMVGTFLWGRLNAKNKKKESSEDAEGAVESVHQGAHNPGALNSISPNQNLTPTSSLSPWSAASRPMDMRNSHADIDLMRG 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02499 345 MobiDBLite consensus disorder prediction 301 326 - -
Trre14g02499 345 SUPERFAMILY AF0104/ALDC/Ptd012-like 156 277 - -
Trre14g02499 345 MobiDBLite consensus disorder prediction 282 345 - -
Trre14g02499 345 CDD DUF296 157 271 IPR005175 -
Trre14g02499 345 Gene3D - 158 290 - -
Trre14g02499 345 ProSiteProfiles PPC domain profile profile. 152 294 IPR005175 -
Trre14g02499 345 MobiDBLite consensus disorder prediction 103 122 - -
Trre14g02499 345 MobiDBLite consensus disorder prediction 70 149 - -
Trre14g02499 345 MobiDBLite consensus disorder prediction 20 39 - -
Trre14g02499 345 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 65 319 IPR039605 GO:0003680
Trre14g02499 345 Pfam Plants and Prokaryotes Conserved (PCC) domain 158 271 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02499 Trre-Chr14 24148664 24153439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02499 1 345 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 44.780 5.20e-75 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02499 - - cam:101500720 444.891